Sturnus vulgaris (common starling): 106859042 Help Entry 106859042         CDS       T08833                                  Symbol SCAF8 Name (RefSeq) protein SCAF8   KO K13191   RNA-binding protein 16 Organism svg  Sturnus vulgaris (common starling) Brite KEGG Orthology (KO) [BR:svg00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:svg03021]     106859042 (SCAF8)    03041 Spliceosome [BR:svg03041]     106859042 (SCAF8) Transcription machinery [BR:svg03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      106859042 (SCAF8) Spliceosome [BR:svg03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA binding proteins (RBPs)     106859042 (SCAF8) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CID RRM_1 RRM_occluded Motif Other DBs NCBI-GeneID:  106859042 NCBI-ProteinID:  XP_014741499 LinkDB All DBs Position Unknown AA seq 1358 aa AA seqDB search MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN NVFKSEIIQPLLDMAAGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVAQSLPDPWV SQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQ LTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPSSQLPLVSESVNNSL FHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVE ANVDDSMDIQQQDMDIDEGQDIAEEEIFEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSR SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI GSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEW ETARSSEAAKENTQTTQSPTVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFP VTMSVPPPGYSPIPPPPFLRASFNPSQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPLV QPPLPIAQETLKDVPFTGLVLPVGTVTGNLATPTLSAGSVFNPMPINKPESDDKGSHLTD LQISSSENNRSVQSDVSSSSGLVGGVQPPNVSSNSGLTGEGPAPTVSSSSGLAGGVQPPS VSSSSGLVGGVQPPTVSSNSGLAGGMQLPAVSSSSSLAGGIQPTNASSSSGLMAGVPPPN VSSSSGLLAGVHPPGVSSSPGLLAGMQPPSVSSSSGVLAGVQPPSVSSNSGLLIMPPPNV STSSGLMGVPPPNISSNSGLLAMQHPAAVPNMPHLNIGNQRMPGMPLMDIRPGLMPHSPG PRFPLMQPGMPPQRAIPPPAILDPSLHPPPPRGPFPPGDIFNQTERPFGTPGRQNIDNIS NPEKRLPLGGDNIQQEGDRDYRFPPVENRDNLSRPSPVDVRDSVGRPPVDPREGMGRPPV DGREHFARPHIDMRENFGRPSIDNLGRREHFGFNSDKHWGQRGDYDEREHHAFPIYGGPK GFHEDRERFRHVNYRFDSRSGPSWNRGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREI NGNRFGRDRMPNNWIPPPHPRVFEYFDGATSQRKADNMPQVNGENTETESQPPTAQVQDD PELYEKLTSSVEVNKEKSDTEADIESEPVVESTETEGT NT seq 4077 nt NT seq  +upstreamnt  +downstreamnt atggaggctgtgaaagcctttaacagcgagttgtactcgctaaatgattataagccaccc atttctaaagctaaaatgacacagatcaccaaggcagcaatcaaggctataaagttctac aagcatgttgtacagagtgttgagaaattcattcaaaagtgcaaaccagagtacaaggtg cctggtctgtatgtcattgactccattgtgagacagtcccggcatcagtttggacaagaa aaggatgtatttgcgccaagattcagcaataacatcatcagcactttccagaacttgtac cgttgtcctggtgatgacaagagtaaaattgttagagtgctaaatttatggcagaagaat aatgtgttcaagagtgaaatcattcagcctctcttggatatggcagcaggaattcctcct cctgttgtgacccctgtcttgcccagcactacagctgctatgagcaacaatacgccaggt acacctgtgactccagttaccccagccaatgtggcgcagagtttacctgatccttgggta tctcagattgctaacacagacacccttgctgctgttgcacagattttacagagtcctcaa ggccagcagcttcagcagttgatacagacactgcagatacagcagcagaaacctcagcct tcgctacttcaagccctggatgctggtctcgtcgtccagttacaggccctcacagcacag ctcacagctgcagctgctgctgctaacacacttaatccactggaacagagtgtctctttt aataagaagctgatggacaggtttgactttggggaggaatctgaacaaaatgaagagcct aaaaaggaaactccctcttcccaattgccattagtatcagaatctgtgaacaactcactt tttcaccaactcgccgaacagttacagcagcaaaacttagaacatctcagacaacagctt ctggagcagcagcagcctcaaaaggcgagccctgaggagaatcaagaaggaaattttggt tcagagcattctgcatcaccatcacaagggagtagtcaacagcagtttttagaagtggaa gcaaatgtagatgattcaatggatattcaacaacaggacatggatatagatgaaggtcag gatattgctgaagaagagatttttgaacaagaagaaaagaaatctgctgttcgttcaaga tcaagaactcgttcaagatctcgttcaaggtcaccaagaaaacgaaggtctagatcacgg tccggttctcgtaagcggaaacacagaaaacgttcacgctcaagatcaagagaaaggaag agaaagtcatctcggtcatactccagtgaaagaagggctagggaaagggaaaaagaacgt cagaaaaagggattgcctcctatacggtcaaaaacactaagtgtttgcagtactactctt tgggtaggtcaagtagacaagaaggctacacagcaagatttaacgaacttgtttgaagaa tttggacaaatagagtcaattaatatgattcccccaagaggatgtgcttatgtctgtatg gtacatagacaagatgcatatcgtgctcttcagaaacttagttctgggtcatataaaatt ggatctaaaattattaagattgcttgggctttgaataaaggtgtgaaaacagaatacaaa caattctgggatgtggatctgggagtttcctatattccatgggagaaagtgaaattggat gatttggagggctttgctgaaggtggcatgattgaccaggaaacagttaatacagagtgg gaaacagccagaagctcagaagctgctaaagaaaatactcaaacaacgcagagtcctacg gttgataagagcactgttattacaacacagacagaagcttacacacaaccagtcactatg ctgcagattccagtagctccagctgtgcctgctgttagcttggttccacctgcgtttcct gtcacaatgtctgtccctcctcctggttacagcccaattcctcctccacccttcttgaga gcaagtttcaacccttcacagccacctccaggttatatgcctcctccagttccacctgtt gttccacctcctgttgttccaccacctgttgtcccaccagttgttccaacacctttagta cagcctccattaccaattgcacaagagacgctgaaggatgttccttttactggccttgtt ctaccagttggcacagttactggcaatctagctactccaacattatctgctggaagtgtt tttaatcccatgccaatcaacaaaccagaatcagatgataaaggatcacatcttacagac cttcagatttcttccagtgaaaataatagatctgtgcaaagtgatgtctcaagtagctct ggacttgttggaggagtgcagccacccaatgtctcaagcaattctgggcttactggagaa gggcccgcacccactgtctcaagtagctctggacttgcagggggagtacagccacccagt gtttcaagcagctctggacttgtaggaggagtgcaaccaccaactgtttccagcaattct ggtcttgcaggaggaatgcagctacctgctgtctccagtagctcttctcttgctggcggg attcagccaactaacgcctcaagtagctctggacttatggctggagtgccaccaccaaat gtctcaagtagctcagggcttctagctggagttcatccacctggtgtctcaagcagccct ggccttctggcaggaatgcagccacccagtgtgtccagcagctcaggagttctggcagga gtacagccaccgagtgtttcaagcaattctgggcttctcataatgccaccacccaatgtt tcaactagttctggacttatgggagtgccaccaccaaatatttcaagtaattctggactt ctggcaatgcagcatccagctgcagttccaaacatgcctcatttaaatatcggtaatcaa agaatgccaggaatgcctcttatggatatccgtccaggcctaatgccccattcacctgga ccaaggtttccactaatgcagccaggaatgccaccacagcgtgctattcctcctcctgca atccttgatccatctcttcacccaccaccacctcgaggtccttttcctccaggagatatt tttaatcaaacagaaagaccttttggaacaccaggaagacaaaatattgataacatttct aatccagagaaaaggctaccacttggaggtgataatattcaacaggagggagacagagat tatcgctttcctccggtggaaaaccgagataatcttagcagaccatctccagtggatgtc agagattctgttggacgaccaccagttgatccaagggagggtatgggaaggcctccagta gacggaagagaacactttgcaagaccacatatagacatgagagaaaattttggaagacca agtatagataaccttggccgaagagagcattttggtttcaattcagacaagcactgggga cagagaggagattatgatgaaagagagcaccatgccttccctatttatggtggtcctaaa ggtttccatgaagacagagagaggtttcggcatgtaaactataggtttgatagtagaagt ggtcccagttggaatagaggatttgaacaagatgctcacagagattttgatgaccgcaga agaccctgggaaagacagagggatagggatgacagagattttaatttttgcagagaaatt aatggaaacaggtttggaagagacagaatgccaaacaactggatcccgcctccacatcca cgggtttttgaatattttgatggggccacttctcaacgcaaagctgataatatgccccag gtaaatggtgaaaatacagagacagaaagtcagccaccaactgcacaggtgcaggatgat ccagaactttatgaaaaactgacatcttccgtcgaggtaaacaaagagaagagtgacaca gaagctgatatagagagtgaaccagtggtagaaagcacagaaactgaggggacataa

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