Sturnus vulgaris (common starling): 106859330
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Entry
106859330 CDS
T08833
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
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]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svg03000
]
106859330 (HMBOX1)
Transcription factors [BR:
svg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106859330 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
106859330
NCBI-ProteinID:
XP_014741977
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSGYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSMAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPMPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTSHSDHQ
DPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagtcctgctggaaaccatgtctcactacacagacgagcca
agattcaccatagaacaaatcgacctcctgcagcgcctgagacgcacgggaatgaccagg
cacgagatcctgcacgccctggaaaccttggaccgtctggaccaagagcacagcgacaaa
ttcgggaggagatcaggctacggaggaggctcctacagcaacagcaccaacaatgtgccg
gcatcgtcctccacggccacggcttcgacacagacgcagcactccgggatgtcaccgtcc
ccgagcaacagttacgacacctccccacagccttgcactacgaaccagaacgggagggag
agtaacgagaggttgtctgctttcaacgggaagatgtcacccacccgctaccccctggca
aacagcatggcccagaggtcctacagcttcgaggcttccgaggaggatctggacatcgat
gacaaagtggaggagctgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctcgccaaccggagaatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcccattggctgttgcagcaggggtcagacctgagtgaacagaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacactaagcatgaga
cctgctcccatgccaatagaagagccagaatggagacagacacctcccccagtcacagct
acctctgggaccttcagactacggcgaggcagtcggttcacgtggagaaaggagtgcctg
gctgttatggagagttacttcaatgagaatcaatatcccgacgaggcaaagagagaagaa
attgccaacgcctgtaatgcagttatacaaaaaccaggaaaaaaattatcggatttggag
cgagttacctccctcaaagtgtacaactggtttgccaacaggaggaaggagatcaagaga
agagccaatattgaagcagcaatcctggagagccatggaatagatgtacagagtccaggg
ggtcattccaacagcgacgacgtggacggcaacgactactcagagcaggacacttggcaa
gtacgcaacggggaggaggagggacgatgttccgagggaggcagagaagcagagaaggta
gaagaagacaggaggatctgctccaaacaagatgacagcactagccacagtgaccaccaa
gaccccatttctttagctgtggagatggcagcagtcaaccacaccatcctggcactggcc
cggcaaggagccaacgagatcaagacagaagctctggacgacgactga
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