Sturnus vulgaris (common starling): 106859357
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Entry
106859357 CDS
T08833
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg04510
Focal adhesion
svg04512
ECM-receptor interaction
svg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106859357 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106859357 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106859357 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svg04147
]
106859357 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
svg00536
]
106859357 (COL4A6)
Exosome [BR:
svg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106859357 (COL4A6)
Glycosaminoglycan binding proteins [BR:
svg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106859357 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106859357
NCBI-ProteinID:
XP_014742035
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
MPFLKGGKKSNNGPCGGRDCSAGCKCFPEKGARGRPGLIGLQGPIGAPGFTGPEGLPGAK
GERGAMGPPGPAGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLAGLDGCNGTTGSHGIS
GPDGFPGLPGLPGRPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGVLGPKGFPGPIGPAG
PIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKG
KQGEKGEQGPQGFPGDQGLPGIPGFGGAGEKGEKGVPGLPGGRGLLGLDGSEGIPGRKGH
PGVPGYPGLDGVEGMKGELGDIGPPGPPVIIDREGVVISGAPGDPGNVGIPGPPGDEGII
GLPGLPGAPGFPGLERDGMGPGGSPGIPGVKGEVGEPGRATIGIPGPPGRGGLPGLPGAP
GLPGSPRPSFSPVIILSGRTGALGEPGQRGLPGALGPKGYKGEAGDCACDGGGTRAGLKG
ISGPPGPSGRPGVPGAKGVCGDPGSVGAPGLRGHPASAGQQGLPGPKGEKGDPSYATVKG
VSGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGLPGDGGLGFPGEKGLPGLPGSKGHRGE
TGSPGIGYPGPSGVRGPPGDTGMDGLPGQAGLPGPPGITLPCIVPGAYGPPGIPGFPGLP
GPKGSKGFSGIPGQPGLHGSKGQPGSPGIIGLLGEPGFPGPRGEQGSQGLPGLDGTDGLP
GKMGAPGLAGIKGALGDLFGAESGTLGERGRPGLPGDKGVTGDTGFPGPKGLDGRPGLLG
VKGEQGHPGYSGVPGMRGPPGPGGTFGIKGKPGPLGSAGLAGAPGPPGVKGMAGDIGPQG
PAGMKGFPGLDGAPGSPGERGFLGPPGPLGQDGHPGFSGPKGEKGSSGLLGFPGMPGLPG
VPGVNGIKGTPGTAGGKGSPGVVGLQGQKGDRGDIGPPGLPVLWTSEQALQIKGDKGDPG
LAGLGGFPGPRGDKGIPGNRGQPGLPGPVGSPSKERGLHGDPGFPGPPGQPGLPGQKGAH
GIIGFPGMPGERGSDGTTGTLGFPGPIGLPGPKGEQGESVRVPGIAGPKGERGDPGFPGE
RGREGLKGEPGYPGNTGVNGPKGSPGDLGQEGPAGIPGNAGLRGAPGPPGSPGQPGSVGF
PGAHGIAGPKGFHGFPGLNGLNGLQGTKGSPGTPGLSEAGLKGPAGLPGAKGEEGSPGLG
RGAAGFPGTKGSSGDMGPPGPMGLPGLPGKPGVSLPSDIRGRPGDAGIPGTDGSAGFPGP
PGPRGTSGPASDQGDTGTTGFPGVLGLRGIKGDVGPTGPVGLPGASGFKGARGEPGLMGM
PGKDGPPGDPGYAGLKGEMGHRGLPGRPGAPGITPQPEEVTAPAGLPGLPGIDGVPGFDG
DPGFHGPAGKPGPKGLPGRSGLKGRDGLPGTPGIDGDPGLSGAPGPQGFEGVAGKPGSLG
LPGMPGRSVAVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSC
LPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSVQIPQYISRCSVCEAPS
QAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIE
CNGAQGTCHYFANKYSFWLTTVEQEQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcttgaagggtggaaaaaagtccaacaatgggccatgtgggggccgcgattgc
agtgctggatgcaaatgttttccagagaagggtgcacggggtcgaccaggactgattggg
cttcaaggaccaataggagcacctggatttactggcccagaaggtttgcctggagcaaaa
ggtgagagaggagcaatgggccctcctggaccagctggacagaaaggtgacaagggtcca
atgggagttccaggatttcagggcatcaacgggatcccaggtcaccctgggcagtctgga
cctagaggcctggctggcctagatggctgcaatggtaccactgggagtcatggcatttct
ggaccagatggatttcctggcctgcctggactgcctggtcgtcctggcccaaaaggcctt
aaaggagaacctgtttttgctcaagggagtcttaaaggaatgaagggtgaaaatggtctt
cctggactggatggagttcttggcccaaaaggttttccaggtccaataggtcctgcaggg
cccataggattaccaggtttgcagggtccagtgggtccccctgggccaccaggtccaaaa
ggtaacatgggattaggctttcaaggagagaaaggagaaaagggtgatgtagggctgcct
gggcccccaggtcccccaccatccactggaatactggaattcatgggatttccaaagggg
aagcaaggagaaaagggtgagcaaggtcctcaaggatttcctggagaccaaggattgcct
ggcatcccaggctttggaggcgctggagaaaaaggagaaaaaggtgtgcctggcttaccg
ggtggcaggggtcttttgggacttgatggatctgaaggaatcccaggaagaaagggccat
ccgggtgttccaggctatccaggactggatggagttgaaggcatgaagggtgaattaggt
gacattggtcccccaggtccacctgtcattattgacagggaaggtgtagtcatttcaggt
gccccaggtgaccctggaaacgtgggaatacctggtcctccaggagacgaagggatcatt
ggtttacctggccttccaggggctccagggtttccaggcctggagagagatggaatgggc
cctggagggtctccaggtattccaggagtcaagggtgaagtgggagagccaggaagagca
acgattggaataccaggccctcctggcagaggtggtttaccaggtctgccaggagcacca
ggattgcctggttcaccacgcccttcattctccccagtgataatcctgagtggaaggact
ggggccctgggggagcctgggcaaagagggcttccaggagctttgggtccaaagggctac
aaaggagaggcaggtgattgtgcttgtgatggaggaggtacaagagctggtcttaaaggc
atctcaggtccaccaggtccgtcaggaagacctggtgtacctggtgccaagggcgtttgt
ggagaccctggctctgtgggagcaccaggactgcgaggccatccggcttcagctggtcag
caaggacttccaggtcctaagggagaaaaaggggatccgtcctatgcaacagtcaaaggt
gttagtggggatcgtggtgcgacagcacccagaggaccttcaggcatcccaggaactccg
ggcagggatggacttccaggcttgccaggcccaccaggccttccaggtgatggtggactg
ggtttcccaggtgaaaaaggtctgccaggattacctggctccaagggccatcgtggagaa
actggttctcctggcattggatacccaggtcctagtggagttcgtggaccaccgggtgac
actggaatggatgggttgccaggacaagcaggtcttccaggccctccaggtatcacctta
ccctgcatagtccctggagcatatgggcccccagggattcccggcttcccaggactgcca
ggtcctaaaggcagcaaaggcttttctggcattccgggccaacctgggttacatgggtct
aaaggacagccagggtctccaggaataataggcttgctaggggaacctggcttccctgga
cctcgaggagagcaaggctcacaaggacttccaggactggatggaacagatggtttacct
gggaaaatgggtgctccaggcttagctggaataaaaggagctcttggagatctatttggt
gctgagagtggaaccttgggagagcgtggccgacctggacttccaggtgataaaggggtt
acaggtgatactggatttccaggaccaaaagggctggatggaagaccaggcctcctgggt
gttaaaggtgaacagggtcatccaggatattcaggtgtccctggaatgcggggacctcct
ggccctggaggtacttttggcattaagggaaaaccaggacccttggggtcagctggcctt
gcaggagcaccaggacctcctggagtcaaaggcatggctggggatataggaccacaaggc
cctgctggtatgaaaggcttcccaggtcttgatggtgctccaggatctcctggggaaaga
ggattcttagggccacctggacctcttggtcaagatggacatccaggtttctctgggcca
aaaggtgagaaagggtcttctggcctgcttggtttccctggcatgccaggactgcctggt
gtccctggagtgaatgggattaaaggaactcctggcacagctggaggaaaaggaagtcca
ggagttgtgggacttcaaggtcaaaaaggtgacagaggtgatataggtccaccaggtctt
cctgttctttggacttcagaacaggcacttcaaatcaaaggagacaaaggagatcctgga
ttagctggacttggaggattcccaggacctagaggtgataaaggaatcccaggaaaccgt
ggacagcctggtctccctggtccagttgggtcaccaagcaaagagagaggtcttcatggt
gacccaggcttccctggtccacctggacaacctggcctgccaggacagaagggtgcacat
ggtatcataggatttccaggaatgccaggagagaggggttcagatggcaccacaggaaca
cttggatttccaggacctattggccttcctggtccaaagggtgaacagggagagtctgtt
cgtgttcctggcattgctggaccaaaaggagagagaggagaccccgggtttccaggagag
agaggaagagaaggactcaagggtgaaccaggctacccaggaaacactggggtgaatgga
cccaaaggcagcccaggagatcttggccaagaaggaccagcaggaatccctggaaatgct
gggctgagaggagcccctggcccaccaggatccccaggacagccaggatctgttggattc
cctggagctcatggaatagcaggacctaaaggctttcatggatttccaggtttaaatggt
ctgaatggcttgcaaggcacaaaagggtctcctgggacaccaggtctgagtgaagctgga
ctgaaaggacctgcaggtctcccaggtgcaaagggtgaagaaggctctccaggcttggga
agaggagctgcgggattccctggaacaaagggctcatcgggagacatgggtccccctggt
cctatgggactgcctggcctgccaggaaaacctggagtttctcttccatctgatatacgt
gggagacctggagatgctggcattccaggcactgatgggagtgcaggttttccaggtcct
ccaggaccacgagggacctctggcccagcttctgaccaaggtgacacaggcactacaggt
ttcccgggtgttcttggcttgcgaggcattaagggtgacgtggggcccactggtccagtt
ggactccctggagcatctggattcaaaggtgcaagaggcgagcctggcctgatggggatg
ccaggcaaagatgggcctccgggggatcctggctatgctgggctgaaaggtgaaatgggc
catcgaggtctccctggcagaccaggggctccgggaataaccccacagccagaagaagtg
acagcccctgcaggattacctggtctgccaggaattgatggtgttcctggctttgatgga
gatcctggattccacggcccagctggaaaaccaggcccaaaaggtttgccaggaagatct
ggtttgaaaggacgtgatggcttacctggaactcctggcatagatggggatccaggactt
tcaggtgccccaggaccacagggatttgaaggtgttgctgggaagccgggttcccttggt
ttaccgggaatgcctggtcggagtgtggccgttggatacactctagtgaagcacagtcag
tcagatcagatccccccatgtcccataggaatgaataaactctgggacggctacagctta
ttgtatgtggaggggcaggagaagtcacacaaccaggatctcggttttgctggctcatgt
ttgcctcgcttcagcaccatgccttttatttactgcaacatcaatgaagtgtgctactat
gccagccgaaatgacaagtcctactggctgtccaccactgctcccatccccatgatgccc
gtggacagcgtccagatcccacagtacatcagccggtgctctgtgtgtgaagcaccttcc
caggctgtggctgtgcatagccaggacatcaccatcccacagtgtcccctgggctggcgc
agcctgtggataggatactccttccttatgcacactgcagcaggggcggaaggtggaggc
cagtcccttgtctcacctggttcttgcctggaggatttccgagctactccattcattgag
tgcaatggtgctcagggaacgtgccattactttgccaacaagtacagcttttggctgacc
acagtggagcaggaacagcagtttgtcagtgctcctccctcagagactctgaaagcaggg
cagcttcggactcgcgtcagccgctgccaggtgtgcatgaagaacttgtag
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integrated database retrieval system