KEGG   Sturnus vulgaris (common starling): 106859357
Entry
106859357         CDS       T08833                                 
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
svg  Sturnus vulgaris (common starling)
Pathway
svg04510  Focal adhesion
svg04512  ECM-receptor interaction
svg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:svg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106859357 (COL4A6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106859357 (COL4A6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106859357 (COL4A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:svg04147]
    106859357 (COL4A6)
   00536 Glycosaminoglycan binding proteins [BR:svg00536]
    106859357 (COL4A6)
Exosome [BR:svg04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   106859357 (COL4A6)
Glycosaminoglycan binding proteins [BR:svg00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106859357 (COL4A6)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 106859357
NCBI-ProteinID: XP_014742035
LinkDB
Position
Unknown
AA seq 1676 aa
MPFLKGGKKSNNGPCGGRDCSAGCKCFPEKGARGRPGLIGLQGPIGAPGFTGPEGLPGAK
GERGAMGPPGPAGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLAGLDGCNGTTGSHGIS
GPDGFPGLPGLPGRPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGVLGPKGFPGPIGPAG
PIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKG
KQGEKGEQGPQGFPGDQGLPGIPGFGGAGEKGEKGVPGLPGGRGLLGLDGSEGIPGRKGH
PGVPGYPGLDGVEGMKGELGDIGPPGPPVIIDREGVVISGAPGDPGNVGIPGPPGDEGII
GLPGLPGAPGFPGLERDGMGPGGSPGIPGVKGEVGEPGRATIGIPGPPGRGGLPGLPGAP
GLPGSPRPSFSPVIILSGRTGALGEPGQRGLPGALGPKGYKGEAGDCACDGGGTRAGLKG
ISGPPGPSGRPGVPGAKGVCGDPGSVGAPGLRGHPASAGQQGLPGPKGEKGDPSYATVKG
VSGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGLPGDGGLGFPGEKGLPGLPGSKGHRGE
TGSPGIGYPGPSGVRGPPGDTGMDGLPGQAGLPGPPGITLPCIVPGAYGPPGIPGFPGLP
GPKGSKGFSGIPGQPGLHGSKGQPGSPGIIGLLGEPGFPGPRGEQGSQGLPGLDGTDGLP
GKMGAPGLAGIKGALGDLFGAESGTLGERGRPGLPGDKGVTGDTGFPGPKGLDGRPGLLG
VKGEQGHPGYSGVPGMRGPPGPGGTFGIKGKPGPLGSAGLAGAPGPPGVKGMAGDIGPQG
PAGMKGFPGLDGAPGSPGERGFLGPPGPLGQDGHPGFSGPKGEKGSSGLLGFPGMPGLPG
VPGVNGIKGTPGTAGGKGSPGVVGLQGQKGDRGDIGPPGLPVLWTSEQALQIKGDKGDPG
LAGLGGFPGPRGDKGIPGNRGQPGLPGPVGSPSKERGLHGDPGFPGPPGQPGLPGQKGAH
GIIGFPGMPGERGSDGTTGTLGFPGPIGLPGPKGEQGESVRVPGIAGPKGERGDPGFPGE
RGREGLKGEPGYPGNTGVNGPKGSPGDLGQEGPAGIPGNAGLRGAPGPPGSPGQPGSVGF
PGAHGIAGPKGFHGFPGLNGLNGLQGTKGSPGTPGLSEAGLKGPAGLPGAKGEEGSPGLG
RGAAGFPGTKGSSGDMGPPGPMGLPGLPGKPGVSLPSDIRGRPGDAGIPGTDGSAGFPGP
PGPRGTSGPASDQGDTGTTGFPGVLGLRGIKGDVGPTGPVGLPGASGFKGARGEPGLMGM
PGKDGPPGDPGYAGLKGEMGHRGLPGRPGAPGITPQPEEVTAPAGLPGLPGIDGVPGFDG
DPGFHGPAGKPGPKGLPGRSGLKGRDGLPGTPGIDGDPGLSGAPGPQGFEGVAGKPGSLG
LPGMPGRSVAVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSC
LPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSVQIPQYISRCSVCEAPS
QAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIE
CNGAQGTCHYFANKYSFWLTTVEQEQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq 5031 nt   +upstreamnt  +downstreamnt
atgcctttcttgaagggtggaaaaaagtccaacaatgggccatgtgggggccgcgattgc
agtgctggatgcaaatgttttccagagaagggtgcacggggtcgaccaggactgattggg
cttcaaggaccaataggagcacctggatttactggcccagaaggtttgcctggagcaaaa
ggtgagagaggagcaatgggccctcctggaccagctggacagaaaggtgacaagggtcca
atgggagttccaggatttcagggcatcaacgggatcccaggtcaccctgggcagtctgga
cctagaggcctggctggcctagatggctgcaatggtaccactgggagtcatggcatttct
ggaccagatggatttcctggcctgcctggactgcctggtcgtcctggcccaaaaggcctt
aaaggagaacctgtttttgctcaagggagtcttaaaggaatgaagggtgaaaatggtctt
cctggactggatggagttcttggcccaaaaggttttccaggtccaataggtcctgcaggg
cccataggattaccaggtttgcagggtccagtgggtccccctgggccaccaggtccaaaa
ggtaacatgggattaggctttcaaggagagaaaggagaaaagggtgatgtagggctgcct
gggcccccaggtcccccaccatccactggaatactggaattcatgggatttccaaagggg
aagcaaggagaaaagggtgagcaaggtcctcaaggatttcctggagaccaaggattgcct
ggcatcccaggctttggaggcgctggagaaaaaggagaaaaaggtgtgcctggcttaccg
ggtggcaggggtcttttgggacttgatggatctgaaggaatcccaggaagaaagggccat
ccgggtgttccaggctatccaggactggatggagttgaaggcatgaagggtgaattaggt
gacattggtcccccaggtccacctgtcattattgacagggaaggtgtagtcatttcaggt
gccccaggtgaccctggaaacgtgggaatacctggtcctccaggagacgaagggatcatt
ggtttacctggccttccaggggctccagggtttccaggcctggagagagatggaatgggc
cctggagggtctccaggtattccaggagtcaagggtgaagtgggagagccaggaagagca
acgattggaataccaggccctcctggcagaggtggtttaccaggtctgccaggagcacca
ggattgcctggttcaccacgcccttcattctccccagtgataatcctgagtggaaggact
ggggccctgggggagcctgggcaaagagggcttccaggagctttgggtccaaagggctac
aaaggagaggcaggtgattgtgcttgtgatggaggaggtacaagagctggtcttaaaggc
atctcaggtccaccaggtccgtcaggaagacctggtgtacctggtgccaagggcgtttgt
ggagaccctggctctgtgggagcaccaggactgcgaggccatccggcttcagctggtcag
caaggacttccaggtcctaagggagaaaaaggggatccgtcctatgcaacagtcaaaggt
gttagtggggatcgtggtgcgacagcacccagaggaccttcaggcatcccaggaactccg
ggcagggatggacttccaggcttgccaggcccaccaggccttccaggtgatggtggactg
ggtttcccaggtgaaaaaggtctgccaggattacctggctccaagggccatcgtggagaa
actggttctcctggcattggatacccaggtcctagtggagttcgtggaccaccgggtgac
actggaatggatgggttgccaggacaagcaggtcttccaggccctccaggtatcacctta
ccctgcatagtccctggagcatatgggcccccagggattcccggcttcccaggactgcca
ggtcctaaaggcagcaaaggcttttctggcattccgggccaacctgggttacatgggtct
aaaggacagccagggtctccaggaataataggcttgctaggggaacctggcttccctgga
cctcgaggagagcaaggctcacaaggacttccaggactggatggaacagatggtttacct
gggaaaatgggtgctccaggcttagctggaataaaaggagctcttggagatctatttggt
gctgagagtggaaccttgggagagcgtggccgacctggacttccaggtgataaaggggtt
acaggtgatactggatttccaggaccaaaagggctggatggaagaccaggcctcctgggt
gttaaaggtgaacagggtcatccaggatattcaggtgtccctggaatgcggggacctcct
ggccctggaggtacttttggcattaagggaaaaccaggacccttggggtcagctggcctt
gcaggagcaccaggacctcctggagtcaaaggcatggctggggatataggaccacaaggc
cctgctggtatgaaaggcttcccaggtcttgatggtgctccaggatctcctggggaaaga
ggattcttagggccacctggacctcttggtcaagatggacatccaggtttctctgggcca
aaaggtgagaaagggtcttctggcctgcttggtttccctggcatgccaggactgcctggt
gtccctggagtgaatgggattaaaggaactcctggcacagctggaggaaaaggaagtcca
ggagttgtgggacttcaaggtcaaaaaggtgacagaggtgatataggtccaccaggtctt
cctgttctttggacttcagaacaggcacttcaaatcaaaggagacaaaggagatcctgga
ttagctggacttggaggattcccaggacctagaggtgataaaggaatcccaggaaaccgt
ggacagcctggtctccctggtccagttgggtcaccaagcaaagagagaggtcttcatggt
gacccaggcttccctggtccacctggacaacctggcctgccaggacagaagggtgcacat
ggtatcataggatttccaggaatgccaggagagaggggttcagatggcaccacaggaaca
cttggatttccaggacctattggccttcctggtccaaagggtgaacagggagagtctgtt
cgtgttcctggcattgctggaccaaaaggagagagaggagaccccgggtttccaggagag
agaggaagagaaggactcaagggtgaaccaggctacccaggaaacactggggtgaatgga
cccaaaggcagcccaggagatcttggccaagaaggaccagcaggaatccctggaaatgct
gggctgagaggagcccctggcccaccaggatccccaggacagccaggatctgttggattc
cctggagctcatggaatagcaggacctaaaggctttcatggatttccaggtttaaatggt
ctgaatggcttgcaaggcacaaaagggtctcctgggacaccaggtctgagtgaagctgga
ctgaaaggacctgcaggtctcccaggtgcaaagggtgaagaaggctctccaggcttggga
agaggagctgcgggattccctggaacaaagggctcatcgggagacatgggtccccctggt
cctatgggactgcctggcctgccaggaaaacctggagtttctcttccatctgatatacgt
gggagacctggagatgctggcattccaggcactgatgggagtgcaggttttccaggtcct
ccaggaccacgagggacctctggcccagcttctgaccaaggtgacacaggcactacaggt
ttcccgggtgttcttggcttgcgaggcattaagggtgacgtggggcccactggtccagtt
ggactccctggagcatctggattcaaaggtgcaagaggcgagcctggcctgatggggatg
ccaggcaaagatgggcctccgggggatcctggctatgctgggctgaaaggtgaaatgggc
catcgaggtctccctggcagaccaggggctccgggaataaccccacagccagaagaagtg
acagcccctgcaggattacctggtctgccaggaattgatggtgttcctggctttgatgga
gatcctggattccacggcccagctggaaaaccaggcccaaaaggtttgccaggaagatct
ggtttgaaaggacgtgatggcttacctggaactcctggcatagatggggatccaggactt
tcaggtgccccaggaccacagggatttgaaggtgttgctgggaagccgggttcccttggt
ttaccgggaatgcctggtcggagtgtggccgttggatacactctagtgaagcacagtcag
tcagatcagatccccccatgtcccataggaatgaataaactctgggacggctacagctta
ttgtatgtggaggggcaggagaagtcacacaaccaggatctcggttttgctggctcatgt
ttgcctcgcttcagcaccatgccttttatttactgcaacatcaatgaagtgtgctactat
gccagccgaaatgacaagtcctactggctgtccaccactgctcccatccccatgatgccc
gtggacagcgtccagatcccacagtacatcagccggtgctctgtgtgtgaagcaccttcc
caggctgtggctgtgcatagccaggacatcaccatcccacagtgtcccctgggctggcgc
agcctgtggataggatactccttccttatgcacactgcagcaggggcggaaggtggaggc
cagtcccttgtctcacctggttcttgcctggaggatttccgagctactccattcattgag
tgcaatggtgctcagggaacgtgccattactttgccaacaagtacagcttttggctgacc
acagtggagcaggaacagcagtttgtcagtgctcctccctcagagactctgaaagcaggg
cagcttcggactcgcgtcagccgctgccaggtgtgcatgaagaacttgtag

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