KEGG   Sturnus vulgaris (common starling): 106859936
Entry
106859936         CDS       T08833                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
svg  Sturnus vulgaris (common starling)
Pathway
svg03013  Nucleocytoplasmic transport
svg03015  mRNA surveillance pathway
svg03040  Spliceosome
svg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:svg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106859936 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    106859936 (ALYREF)
   03015 mRNA surveillance pathway
    106859936 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106859936 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svg03019]
    106859936 (ALYREF)
   03041 Spliceosome [BR:svg03041]
    106859936 (ALYREF)
Messenger RNA biogenesis [BR:svg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106859936 (ALYREF)
    TREX complex
     106859936 (ALYREF)
Spliceosome [BR:svg03041]
 Complex C
  Other components
   EJC/TREX
    106859936 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106859936 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 106859936
NCBI-ProteinID: XP_014742998
LinkDB
Position
Unknown
AA seq 254 aa
MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP
VMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADIQ
ELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS
QIDTQRRPAQSVNRGGMTRNRGVSGGFGGGGNRRGTRGGNRGRGRGAGRTSKQQLSAEEL
DAQLDAYNARMDTS
NT seq 765 nt   +upstreamnt  +downstreamnt
atggccgacaagatggacatgtccctggacgacatcattaagctgaaccggagccagcgt
ggggccagccgaggcggccggggcggccggggccggggcggcaccgcacgcgggggcggg
cccggccggggcggcgtgggcggcgggcgcgcgggcggcggccccgtgcggaaccgaccg
gtgatggcccggggcggcggcaggaaccgacccgcgccctacagccggccgaagcaactc
cccgagaagtggcagcacgacctgttcgacagcggcttcggggcaggggccggcgtggag
acaggcggaaaactgctcgtctccaacctggacttcggcgtttcagatgcggacatccag
gagctctttgcggagtttgggaccttgaagaaggcagctgtgcactatgacagatctggt
cgcagtctaggaacggcagatgtgcattttgagaggaaggctgatgcgctgaaggcgatg
aagcagtacaacggggtgcccttggatgggcgccccatgaacatccagctggtgacgtca
cagatcgacacgcagcggagaccagcacagagtgtaaacagaggtggcatgaccagaaac
cgtggggtctcggggggatttggaggtggaggcaacaggcgagggactcgtggcgggaac
agagggagaggcagaggagctggacgaacttccaaacagcagctctctgcagaagaacta
gatgcacagctggatgcttacaatgccaggatggacaccagctaa

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