Sturnus vulgaris (common starling): 106859936
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Entry
106859936 CDS
T08833
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03013
Nucleocytoplasmic transport
svg03015
mRNA surveillance pathway
svg03040
Spliceosome
svg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106859936 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
106859936 (ALYREF)
03015 mRNA surveillance pathway
106859936 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106859936 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106859936 (ALYREF)
03041 Spliceosome [BR:
svg03041
]
106859936 (ALYREF)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106859936 (ALYREF)
TREX complex
106859936 (ALYREF)
Spliceosome [BR:
svg03041
]
Complex C
Other components
EJC/TREX
106859936 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106859936 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106859936
NCBI-ProteinID:
XP_014742998
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP
VMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADIQ
ELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS
QIDTQRRPAQSVNRGGMTRNRGVSGGFGGGGNRRGTRGGNRGRGRGAGRTSKQQLSAEEL
DAQLDAYNARMDTS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgacatcattaagctgaaccggagccagcgt
ggggccagccgaggcggccggggcggccggggccggggcggcaccgcacgcgggggcggg
cccggccggggcggcgtgggcggcgggcgcgcgggcggcggccccgtgcggaaccgaccg
gtgatggcccggggcggcggcaggaaccgacccgcgccctacagccggccgaagcaactc
cccgagaagtggcagcacgacctgttcgacagcggcttcggggcaggggccggcgtggag
acaggcggaaaactgctcgtctccaacctggacttcggcgtttcagatgcggacatccag
gagctctttgcggagtttgggaccttgaagaaggcagctgtgcactatgacagatctggt
cgcagtctaggaacggcagatgtgcattttgagaggaaggctgatgcgctgaaggcgatg
aagcagtacaacggggtgcccttggatgggcgccccatgaacatccagctggtgacgtca
cagatcgacacgcagcggagaccagcacagagtgtaaacagaggtggcatgaccagaaac
cgtggggtctcggggggatttggaggtggaggcaacaggcgagggactcgtggcgggaac
agagggagaggcagaggagctggacgaacttccaaacagcagctctctgcagaagaacta
gatgcacagctggatgcttacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system