Sturnus vulgaris (common starling): 106860005
Help
Entry
106860005 CDS
T08833
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03250
Viral life cycle - HIV-1
svg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106860005 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106860005 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svg04131
]
106860005 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svg04147
]
106860005 (PDCD6IP)
Membrane trafficking [BR:
svg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
106860005 (PDCD6IP)
Exosome [BR:
svg04147
]
Exosomal proteins
Proteins found in most exosomes
106860005 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
TCAD2
T2SSM
Motif
Other DBs
NCBI-GeneID:
106860005
NCBI-ProteinID:
XP_014743124
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MTNFISVQLKKASEVDLAKPLCKFIQQSYPGAEAQAEHCRAAEELSRLRRSALGRPLDKH
ESALETLLRYYDQLCSIEPKFPFSENQVCVTFTWKDAFDKGSLFGGSAKLALASLGYEKT
CVLFNCGALASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSALNREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDGIIAKLANQAADYYGDAYKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASRYDEYIN
VKDLVDKINRALAAAKKDNDFIYHDRVPELKDLESIGKASLVKSTPVVVPLSQKFTDLFE
KMVPLQVQQSVSVYNQRKVDLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDTVPHS
ILSKSKSVIEQGGIETVDQLIKDLPELLQRNKEILDESLRLLDEEEATDNDLRTKFKERW
QRTPSSELYKPLRAEGANYHNILNKAMQADGQVKERYQTHRDTIALLCKPEAELNAAIPS
ANPAKTLQGNEVVNVLRTLLANLDEVKKEREQLENDLKSVNFDMTSKFLTALAQDGAINE
EVISVTELDRIYGSYTQKVQESIKKQEELLKNIQNVHHDFSKMKQSNNESNLREEVLKNL
AVANDNFVELVANLKEGTKFYNELTEILLKFQNKCSDIIFARKTERDELLKDLQQSIARE
PSAPSIPLPMYQTMPAAGSKQVASPAPTPAPRTMVGTKPQPPARPPPPVISAASSSSSAL
APSGTAAAPVAAPGASAPAASTASSQAQGPPYPTYPGYPGYCQMPIPMGYNPYMYGQYNL
PYAPSPVYQTPGQPPYPPPQQPGYPFPQQPYYHQQ
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttcatctccgtacagctgaaaaaggcctcggaggtggacctggccaagcca
ctgtgcaagttcattcagcagagctacccgggggccgaggcacaggccgagcactgccgc
gccgccgaggagctcagcaggctccgtaggagcgcgctcggccgcccactcgacaagcat
gagagcgcgctggagacccttctcagatactatgatcagctgtgttcaattgaaccaaag
tttccattctctgaaaatcaggtctgtgtaacatttacgtggaaagacgcttttgataaa
ggatcactttttggaggatctgccaaactggctctggcaagtttgggatatgagaagaca
tgtgttttgttcaactgtggagcactggcaagccagattgcagcagaacagaatctggat
aacgatgaagggctaaaagctgcagctaagcactatcagtttgctagtggtgcttttcaa
cacattaaagacacagttctgtcagccttgaatcgagaacctacagtagacatctctcca
gacacagttgggactctcagtcttattatgctggctcaagcccaagaagtcttttttttg
aaagcgacaagagataaaatgaaagatggtatcatagctaaattggcaaatcaagctgca
gattactatggtgatgcttacaaacagtgtcaatataaagatactttgccgaagtatttt
tatttccaggaggtgtttcctgttctggctgcaaagcactgcattatgcaggccaatgca
gaatatcatcaatctatcctggcaaaacaacagaagaaatttggtgaagaaattgggagg
ttacagcatgcagcagatttggtgaaaacagtagcatctcgttatgatgaatatataaat
gttaaggatctggttgacaaaatcaaccgcgcacttgcagctgccaaaaaagacaatgat
ttcatttaccatgaccgggttcctgagctgaaagatttggagtccattggaaaagctagt
cttgtgaagtctactccagttgttgttccactcagtcagaaattcactgacctgtttgag
aagatggttccattgcaagtacagcaatctgtgagtgtttataaccagaggaaggtagat
ctggtgaacaggtcaatagcccagatgagagaagccacaaatctggcaaatggtgtgttg
gcttccctcaatcttcctgctgctattgaagatgtgtctggtgatactgttcctcactct
attttgagcaagtctaagtctgtgattgagcaggggggaattgagactgttgatcagctg
atcaaagatctgcctgaactgctgcagaggaacaaagaaattctagacgaatctctgaga
ttattagatgaagaagaagctacagacaatgacctgcgaacaaaattcaaagaacgctgg
cagcgaacaccatccagtgaactctataagcctctaagggcagagggagccaattaccat
aatattttgaataaagctatgcaagcagatgggcaggtgaaggaacgctatcagactcac
cgggatacaattgcccttctgtgtaagccagaggcagaactcaatgcagccattccttct
gccaacccagcaaaaacactgcagggaaatgaggttgttaatgtcttaagaactttgctg
gccaatctggatgaagttaagaaggagagagaacaactggaaaatgacctgaaatctgta
aattttgacatgacaagcaaattcctgactgcacttgcgcaggatggtgctataaatgag
gaggttatctctgtgactgagttggacagaatttacggaagttacacacagaaagtgcag
gagtccataaaaaaacaggaagaacttctcaaaaacattcagaatgtgcatcatgacttt
tcgaagatgaaacaatcaaacaacgaatctaatttaagagaagaagtcttgaagaactta
gctgtagcgaatgacaactttgtggaacttgtagctaatttaaaagaaggcacaaagttt
tacaatgagctgacagaaatcctgctgaaattccagaacaagtgcagtgacattatcttt
gctcgcaagactgaaagagatgaactgctcaaagatttgcagcaaagcattgctagggag
cccagtgctccctccattccgctacctatgtatcagaccatgccagcagcaggaagtaag
caagtggcatcacccgctcccactccagccccaagaaccatggtggggactaaaccacag
ccaccagcacggccaccaccaccagtgatttctgcagcaagcagttcctcttctgcatta
gctccttctgggacagctgcagctcctgttgctgctccaggagccagtgcacctgcagca
agcactgcatcttcacaggcacagggaccaccttacccaacttatcccggttacccaggg
tattgccagatgccaattccaatgggctataatccatacatgtatggtcagtataatctg
ccatatgcaccctcacctgtgtatcaaactcctggacaaccaccatatccgccacctcaa
caacctggatacccttttcctcaacagccttattaccatcagcaataa
DBGET
integrated database retrieval system
