Sturnus vulgaris (common starling): 106860593
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Entry
106860593 CDS
T08833
Symbol
CFAP54
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
svg03037
]
106860593 (CFAP54)
Cilium and associated proteins [BR:
svg03037
]
Motile cilia and associated proteins
Sperm associated proteins
106860593 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
106860593
NCBI-ProteinID:
XP_014743982
LinkDB
All DBs
Position
Unknown
AA seq
3097 aa
AA seq
DB search
MAELAGPPVPSAGPPVPAAGPQAPHAAFFGPVARGNPVVDSFEAELRHVLSSLRRLRGAG
EAKPPQHDLHRQGANTLFNIWIKYKPRLPEWYYNKRLVKVGDTLAQIKEYKLALLQCYER
YLQQFVSVNLDDVMDDVHRFKSTFFPNGVRDKKAALTFHALQARNVCIYQMVCSRDRNLQ
NQESLQTCLNVLTSLRLTMQVALPQENLCWLIYNGTIHIYTICRHLMVVGESAKVLEYLL
WASICMESSIPLLSVHYLTWRATLYTAVSQCYFDCQASIHGEIFARRGLIKIDELKQLED
ISSLENTETKKIFKEATLKMSVMIFKRAVYESRRKSNSFRPEPKVNPRKAVNLSWPRTTT
ERLLVKMFDGAAAQFLAILEALSDRSRNLFPPHPPVPDETEIRGVTSELFSAGLEILSET
NDTSQFGIINPSSSLLQLMLTGEKGVSGDAAVKFVKLAFSYEEWNVFYSALEFVDNFLQA
QDDPTWKKAEIELKLLTLMQPLVFPGKFERSFSISDYNSKATSTRRSSGKTETIKKESLK
PGDPFHDLMILATTVFSCVSTSDQKIHPDKEMLVNVVMCLWQKCKTELQQIQMSGNDCLE
YMHKHRAYQWVHILWMMNEIIEKSNIADTNVMFAEITLCLAAILENVAESTSESKEKEGG
SASLSQDETCDMPEILMKMPTEQLQIAYEVLEKAISGMNTSRLMTLLPDGKSIFDNCCTK
VYSNDQSLNSILGCGDDKTGADNGFVTDLHLDLIQAQHRVAVKLLKITQGAQVVDRSLRS
SKSHEKNIEDFQYLSEELIMKKIKRNKLSRAIFLMQKAAQKFPEDLTTTSQRQLLEEALT
LIEQVEAEQSALYRSLKEAMSNKKKTRSPPPPLLLSRSHCSMTFKPAPFDSDIQVSWYCI
LGSIAGGSNTKVRLNSNKLQNSGEEIPANGKILLEVGGLDANEKYIFAVAAYSSDGKLIG
DAVGQMTKPILAYPPLSATTVRAYLTQVAYQTGNFRLARAAFSPMWDYFVSDSSPLPPNA
AVISASSNLTISEKRLRFEAISQTSPVTLHLFLRNIFAVSDINVMEGALFCDSICSNEIF
YKEQVSRLAECERMIVAIELSNCLNDASYTLQSVVQCYGLLAPLIYHKIFSVPVVQILIK
CLAVLQEIPSATLQRRQEGCYESIQHMIACTSYHTAKVLHSWEEYELAVLIINYGKNLLI
SPAVSPSLSDVKTEETHTGKENCSSRISHLAAMAKAAENLSTLESSLLKLTEPGPGTQLT
GKEDPLFLYPVISCWTSERAYREVLKFRGQTRFLEFFVQLLHKVLNEEKFQCVLEWADSV
EVYMKRRNENFLGTDGISAQARSFTLGESNVLQMFRKKGKDKLKKLAFQTLIMLLSKYIT
RSKFCQMCLEEMPWKSQMNIYLAVAHYHLFKKNLEEQYNIGISGSQHLDSYNMLDPEIFS
LNNSGTVLVREAVEDNVGKPTPPLLEKSEVIETQSLKSPKNRNKQSRTSRSRSTKTPEQQ
DQFPSNTLLLKHFTSIFLHLKRAVVLAHRGGHWTLLQNACRELWNYTQEFQLIANQSHSC
MDAFPITWDFLWSTIWLPFYFASDMIIDMIIDLQASSSLKIVDPKGDFCIPSCLGGIVDE
NGGSNLHPQPPLDDVNVVDLRWICNLILKTIELLYHMKKWEALVHIAVQFNILTHERFTE
QVSPLLVYAQRQLLERIQQFSGPDSHESHFTKYLSDDTQKMSCRNYIGYKFQLPVAHSAS
EGVFPAYSFNPETNNDATDNNQAKALVCVPLDVNDTLKCFRETLEKSKYQSRALRHSRKL
LSLFLAHTQENAGRAISSHICSSRKLKFNVGDEVIFLPTPCDLSKEKYNFSSMVERRQIP
KSQLSVIISSYEQTIGILEMNNQRDLKVQALHELGNLHFYSRNKSAAFKYWCQALDETLN
IADALNTWQELSFPKDATDCFAVRRSTDMSQKFLSQAGAWGCLHAAVLVAKIAQYITTSQ
MRLRTKYCYFSAILFKTLFRASLPHPTSDYDFVQYETNILIPGIDLFSDRYRADISTVLA
SLNFIMFELHYAKQNLIILPLFTLYQYIVSEICKDPAKCIEGRIFKIKVLTDIGFFTEAF
HELSLLFLGERIPWKIPAGYRYTEQMQALEKFDSSKPLMTATNLQVLEDTFNWSLSSTVV
PLCNQQIMNKLTLAKMHLIICLSATINNIPEKVEKTVYCVDNSSLPEPNKTTASTIKVDA
DQNSRQWRQRDRMVHLVDYKDELNMAMLKGILLTEAEESLSYLVQDIQEKYDGDISRYSV
EDLEAIIEAKLELASISLQRHQAALSVALAFSAIRLFQDAKVLSMDVEHFQEEKEERECL
DSTTEGVQLPPHVTARGLVNVHLWLRCRAMLVTALVTQIHGVGHIKGNDGAERRSVIKEV
ILEAEAFGDIDTQAEVMVQAAILDLQEKRPVADIKLLLQKIIGLLQEDTFISLPASLTLV
KSMLLLADILPLQIAEDSEHCSSAVEPLNLLVSAHELTIKALFDCGGLIEQQIEDSTLTC
LVLPTKNIYLPHINLLAQVKMKIGHALAEKVASTAARDRLQWLRVLGHLESALNLCRASA
TKKIDLEAEVLFQIGKTQRQLTEAGHNKSQAVETLLQAIKLSQQHDQKYELIKQSYLEIA
LSYLYFAENNEDVSETDELVPSKASTSSGERSSEEAIKSEVYQVQAWVAIRAASQVSEAM
LASQLVIGMKSVKEQNMKDEVQQQIPEFASMDLFSSYRDFISDGYNVVPETPEVSSTENK
QIPEDCQSEREGTENLAAKATPKKHTITWFLMIRYHNHLKRIYNTNLSAPGSLFARYGHL
GLISDTGIVLRIAEMHSFLEKNLFEYSVCCLENFPVELHDAEESLSSQTDSSEMSLEFSD
ITSIVSHVRTASPVSVIAEECERTESKAARAPDKEISIQWYIPSVAKSSNDSETKVLLLY
AYNTNPVKIGDIAIFSTSVFSGQLWIPLASIISLREKLSDLRKQVEVLMQGPTSFSISVP
TNFLEQSETLKIIPSNKPKLSDAKVYLDEKTEDIAKRCLSEVKALLSVGPALSSPLTEIP
FDITWKSITNLEDMFDLANGCIITEGNLLDWIISLLH
NT seq
9294 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctcgccgggccaccggtcccctccgccgggccaccggtccccgccgccggc
ccgcaggccccgcacgccgctttcttcgggcctgtggcgcggggcaacccggtggtggac
agcttcgaggccgagctgcggcacgtcctgagctccctgcggcggctgcggggcgcgggg
gaggccaagcctccgcagcacgacctgcaccgccagggagcaaatactctgtttaacatt
tggatcaaatataagccacgactaccagagtggtattacaataaaagacttgtgaaagtt
ggtgatacacttgctcagatcaaagaatataagttggcacttctacagtgctatgaaaga
taccttcagcagtttgtttctgtaaaccttgatgatgtcatggatgatgtgcatcgcttt
aaatccaccttttttccaaatggtgtcagagacaaaaaggcagcacttacgttccatgct
ttgcaagcgagaaatgtttgcatttatcagatggtttgcagcagagacagaaatcttcag
aatcaagagtccctgcagacttgtctcaatgtcttgacctcattacgactcactatgcaa
gtggctctacctcaggagaatttatgttggcttatctacaatggtactatccatatttac
accatatgcagacatttgatggtggtgggtgagtctgctaaggtcctggaatacttgctg
tgggccagcatatgcatggaatcatctattccactcttatctgtgcattatttgacatgg
agagccaccctatatacggcagtttctcagtgttattttgattgtcaagccagcattcat
ggagagatatttgctcgccgtggtttgattaaaattgatgaactgaagcaattagaagat
atcagttctctggaaaatacagagacaaaaaagatttttaaagaggccactttaaagatg
tcagtaatgattttcaagagagcagtatatgaatccagaagaaagtcgaacagctttcga
cctgagccaaaagttaacccgagaaaagcagtaaatctgtcatggcctcgcaccactact
gagcggctgctggtgaaaatgtttgatggtgctgcagctcagttcctcgccatcctggaa
gcactgtctgataggagcaggaatctgtttccccctcatcctcctgttcctgatgaaact
gaaattcgtggtgtcacttctgagcttttttctgcgggcctcgaaatcctctcagagacc
aatgacaccagtcagtttggtataattaatccatcatctagtcttctgcagttgatgcta
acaggagaaaaaggggtgtctggagatgctgctgtgaaatttgtaaaactagctttcagc
tatgaagagtggaacgtgttttattctgctcttgaatttgttgataatttccttcaggct
caagatgacccaacatggaagaaggctgaaatagaactcaaactccttacgttgatgcaa
cctttagtattcccaggaaaatttgaacgtagtttttctattagtgattacaatagcaaa
gcaaccagcacacgtcgaagttctggaaagacagagacaattaaaaaggaatccttaaag
cctggagatccttttcatgatcttatgattctggcaacaaccgtgttttcctgtgtctcc
acatctgaccagaaaatccatcctgacaaagaaatgcttgttaatgtagtaatgtgtttg
tggcagaagtgtaaaacagaacttcagcaaatccaaatgagtggaaatgactgcttagaa
tatatgcacaaacaccgagcttaccaatgggttcatatactctggatgatgaatgaaata
attgagaagagcaacatagcagacaccaatgtgatgtttgcagagataaccttatgtcta
gcggcaatactggaaaatgtagctgaatctacaagtgaatctaaggaaaaagaaggagga
agtgcttctctttcacaagatgaaacctgtgatatgcctgaaatactgatgaaaatgcct
acagaacaattacaaattgcttatgaagttcttgaaaaagcaattagtggcatgaacaca
tctcggttaatgacccttttaccagatggaaagtcgatatttgacaactgctgtacaaag
gtgtattccaatgatcagagtttgaattctattttgggatgtggtgatgataaaacagga
gcagataatggttttgtaacagatttacacttggacctcattcaggcccaacatcgagta
gcagtgaaacttcttaaaattacacaaggtgctcaagttgttgacagaagtcttaggtcc
agtaagtctcatgagaagaatattgaagatttccaatatttatcagaggaacttataatg
aaaaaaattaaaaggaataagctatccagagcaatttttttgatgcaaaaggctgcacaa
aagttccctgaagacttaactactacttcccaaaggcagctactggaggaagccctaact
ttaattgagcaagttgaagctgaacaaagtgcattgtatcgcagtctcaaagaagctatg
agcaacaagaaaaaaaccagaagtcctcctcctcctctgttactttccagatcacattgc
tccatgacatttaaaccagccccatttgattcagatattcaggtttcatggtactgtatt
ttgggctctatagcaggaggaagtaatacaaaagtaaggttaaatagcaataaacttcaa
aattcaggagaagagataccagcgaatgggaaaattctcttagaagtaggaggattagat
gccaatgagaaatacatatttgctgtcgcagcgtattcttcagatggaaaacttattgga
gatgctgttgggcaaatgactaagccaatccttgcctatccacccctttctgctactact
gttcgagcatatctaactcaggtggcctatcagacgggcaacttcagattagccagagca
gctttttcaccaatgtgggattactttgtttcagattcttctccactgcctcccaatgca
gctgttatttctgcaagtagtaatttgactatttctgaaaaaaggttacgttttgaagct
atatctcagacttctcctgttaccttgcacctctttttgaggaatatatttgctgtttct
gacattaatgtcatggaaggagcactcttctgtgattccatctgttccaatgagatattt
tataaggagcaagtttctagattagcagaatgtgaaagaatgattgtggcaattgaactt
agcaactgtttgaacgatgcaagttacaccctgcagtctgttgtacaatgttatggcctc
cttgccccacttatttatcataagattttttcagtgccagtagttcagatccttatcaaa
tgcttggctgttctccaagaaattccaagtgctactttgcaaaggagacaggaaggatgt
tacgagagtattcagcatatgatagcttgtacttcatatcatacagcaaaggtactgcat
tcatgggaagagtatgaacttgcagtacttatcattaactatgggaaaaacttgttgatc
tcaccagcagtttcgcccagcctgtcagatgtgaaaactgaagaaacacacactggcaaa
gagaactgttcttcaaggatatcccatttagctgcaatggcaaaagcggcagaaaatctg
agtactcttgaatcaagtctcctcaaactgacagagccaggtcctggaacacaacttaca
ggaaaggaagatcctttgttcctctaccctgtaatttcatgttggacatcagagcgtgct
tatcgagaagtgcttaaattcagagggcaaacacgtttccttgagttctttgttcaactt
ttgcacaaagtcctgaatgaagagaagtttcagtgtgttctggagtgggcagacagtgtg
gaagtttacatgaaaaggaggaatgagaacttccttggtactgatggaatttcagcacaa
gcacgatctttcactttgggagaaagcaatgtgctgcagatgttcagaaagaaaggcaag
gataagttgaagaaattagcttttcaaaccttaataatgctgctgagtaaatacataacc
cgaagtaagttttgtcaaatgtgtcttgaagagatgccctggaagtctcagatgaatatc
tatctggcagttgcacactaccacttatttaaaaagaacctggaagagcaatataatatt
ggaatcagtggttcacagcatctggacagttacaatatgttggatcctgagatattctca
ttaaacaattctggcacagtcctggtgagagaagctgtagaggataacgtaggaaaacca
actcctcctctccttgaaaagtcagaagtgattgaaacccaaagccttaaatctcctaag
aacagaaataaacagagtcgaacttctcgaagtcgatcaacaaagactcccgaacaacag
gaccagtttccatcaaatacccttttgctgaagcattttacgagcatcttcctgcatttg
aaaagagcagtggttcttgctcaccgtggtggccactggacattgcttcaaaatgcttgt
cgagaactttggaactatactcaagaatttcaactgattgctaaccagtcacattcttgt
atggatgcatttcccatcacctgggattttctttggagcaccatctggttgccattttat
tttgcttcagacatgatcattgatatgataattgacctacaggcaagcagttctcttaag
attgtggatcccaaaggagacttttgcattcccagttgtttaggcggtattgtggatgag
aatggtggttctaatctccatccccagcctcctctggatgatgtgaatgtggttgacctg
agatggatatgtaatctgattcttaaaacaatagaattgttatatcatatgaagaagtgg
gaagcactggtacacatagctgtacaatttaacatacttacacatgagaggtttacggaa
caagtgagtccactgctggtatatgctcagaggcagctgctggaaaggatacagcaattc
agtggcccagacagccatgaatcacatttcacgaaatacctgtctgatgatacacagaag
atgagctgcagaaactacatagggtacaaattccagctgcctgttgctcattctgccagt
gaaggggtttttcctgcatactctttcaatcctgagacaaataatgatgctacagataac
aatcaagcaaaagccctagtttgtgtgcctcttgatgtgaatgatacactgaaatgtttt
agagaaactctagaaaaatctaaatatcaaagcagagcactgagacacagcaggaaacta
ctttcattatttcttgcacacacacaagaaaatgctggaagagcaatcagcagtcatatc
tgttcaagcagaaagctgaaatttaacgtgggagatgaagtgatatttctaccgacacca
tgtgacctttctaaagaaaaatataatttctccagtatggttgagaggagacaaatacca
aagtcacagctttcagtaattatctcttcctatgaacaaacaataggaatccttgaaatg
aataaccaaagagatctcaaggtacaggctctacatgaacttggaaatcttcacttttat
tctagaaataaaagcgcagcttttaaatattggtgtcaagcccttgatgaaacactcaac
attgctgatgctcttaacacctggcaagagttaagttttccaaaagatgctacagactgc
tttgcagttagaagatcaactgatatgagtcagaaatttctttctcaggctggagcttgg
ggatgtttacatgcagcagtcctagtggctaagatagctcagtatataacaacatcacag
atgagattaagaacaaaatactgctatttttctgctatactttttaagaccctgtttaga
gcttctcttccacatccaacatctgactatgactttgtacaatatgaaacaaatattctt
attcctggtattgacctgttctctgatcgctacagagctgatatctctactgtacttgca
agtctgaatttcattatgtttgaactacattatgcaaaacaaaatttaataattttacct
ctgttcacattataccaatatattgtatctgagatttgtaaggacccggctaaatgtatt
gaaggaagaatcttcaagattaaagtacttacagatataggattttttacggaggccttt
catgaactatccctgctttttttgggagagagaattccatggaaaataccagcaggatac
agatatactgaacaaatgcaggccttagagaaatttgattcctcaaaacctctcatgact
gctacaaatttgcaggtactggaagatacatttaattggagtctgtcttcaacagtggta
ccactgtgcaaccaacaaattatgaataaattaaccttagccaaaatgcatctcatcatt
tgtctttctgccacaataaataatatacctgaaaaagttgaaaaaactgtatattgtgtt
gataacagcagcttgccagagccaaacaaaactacagcatcaactataaaagttgatgct
gatcagaattcaagacaatggagacaaagagacagaatggtgcatcttgttgactataaa
gatgaattaaatatggccatgctgaaggggattttgttgacagaagctgaagaaagtctt
agctatcttgtacaggacatacaggaaaaatatgatggggacatatctcggtattctgtg
gaagatttagaggctattattgaggccaaacttgaacttgcttctatttctctgcaaagg
catcaagcagctctcagtgttgctttggctttctctgcaattcgacttttccaagatgca
aaagttcttagcatggacgtggaacattttcaagaagaaaaggaagaaagggagtgtttg
gactccaccactgaaggtgttcagctccctccccatgtaacagcacgaggtctcgtgaat
gtacatttgtggctgaggtgtcgagcaatgttagtgactgcactcgtgacacagatacac
ggtgttggtcatatcaaaggaaacgatggggctgagcgcagaagtgtgataaaagaagtt
atattagaggcagaagcctttggtgatattgacactcaggctgaagtgatggttcaagct
gctattcttgacctgcaagaaaaacgtcctgtggcagacatcaaacttcttctgcagaaa
atcatcggtttgctccaagaggatacatttatttccctgccagcttctttgactcttgtg
aaaagtatgcttctcctggcagacatactgcctctgcaaatagcagaggattcagaacat
tgctcttctgcagtagaaccattaaacttgcttgtttcggctcatgagcttaccattaaa
gcactttttgattgtggtggactcattgaacagcaaatagaagacagtacattgacttgc
ctggtcttacccacgaagaatatctacctgccacatattaacttgctagcccaagtcaaa
atgaaaattggacatgcattagctgaaaaagtagcttctacagctgcaagagatcgcttg
caatggctacgtgttcttgggcatttagaatcagcattgaatctttgcagagcatctgca
acaaaaaaaatagatctggaagctgaagttctttttcagataggtaagacacagcgccag
ttaactgaagcaggccataacaagtctcaagctgttgaaaccctgttgcaagctattaag
ctcagccagcaacatgatcaaaaatatgagttaataaaacagtcataccttgaaatagca
ctatcatatttgtattttgccgaaaataatgaggatgtatcagagacagatgagttggtg
ccttccaaagcaagtacctcttctggagaacggtcttctgaggaggctataaaatcagaa
gtctaccaagtacaggcctgggttgcaataagagcagcttcacaggtcagtgaagctatg
cttgcttctcagctggtaattggaatgaagagtgttaaagaacagaacatgaaggatgaa
gtgcaacaacaaatcccagagtttgcttctatggatcttttttcttcgtacagagatttc
atatctgatggatacaatgttgtccctgaaactcctgaagtatcttctactgaaaacaaa
caaatcccagaagactgtcagagtgaaagagaaggaacagagaatcttgccgccaaggcc
accccgaagaaacatacaattacatggtttctcatgattcgttaccacaatcatttaaaa
agaatttataacacaaacctatctgcacctggatcactttttgcaagatatggacacctt
ggtttgatttctgacacgggaattgttctacgcatagcagaaatgcattccttcctggaa
aagaatttgtttgaatattcagtgtgttgtcttgagaattttccagtagaactacatgat
gcagaagaatcactcagtagtcaaactgattcttcagagatgtctcttgaattttctgac
attacatcaatagtgtcacatgtgagaacagcttctccagtttctgtcattgcagaagaa
tgtgagcggacagagagtaaggcagcaagagctccagataaggaaatcagcattcagtgg
tatattccttctgtggcaaagtcatcaaacgattcagaaactaaggttttgttgctttat
gcttataatacaaaccctgtcaagattggcgacattgcgatttttagtacatctgtgttt
tcaggccagttgtggattccattggctagcattatttctttaagggagaaattgtctgat
ctgaggaagcaagttgaagtattgatgcaaggtcctacaagcttttcaatttcagtacct
acaaactttcttgagcaaagtgaaactttgaaaataattccttcaaataaacccaaactg
agtgatgcaaaagtgtatcttgatgaaaaaacagaagacattgctaaaaggtgtttatct
gaagtcaaagcactgctgtctgttggtccagccctgtcctctccattaactgagatccca
tttgatattacttggaaatcaataacaaatttggaagatatgtttgatcttgccaatgga
tgcataataactgaaggaaatcttttagattggatcatttctctgcttcactaa
DBGET
integrated database retrieval system
