Sturnus vulgaris (common starling): 106860735
Help
Entry
106860735 CDS
T08833
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svg03021
]
106860735 (SCAF4)
03041 Spliceosome [BR:
svg03041
]
106860735 (SCAF4)
Transcription machinery [BR:
svg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106860735 (SCAF4)
Spliceosome [BR:
svg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
106860735 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106860735
NCBI-ProteinID:
XP_014744212
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSATAPMAENATNNEGSPPPPAKVPSEPPPVTANSVPSVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQP
PEQKAAFTAPEQKTSFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSVSQPALTSLSFSAQ
AGWCSMPGGFPGEGMQQPVFPQLPNMDPFQQRMMGMQQDPMRHQVPLPPNGQMPGFGLLP
TPQFPPIAQPVMPPAAPVQPTFQSPFPVQAEPHLQKPHQQDMEVEQPPIQEGKRHVSDNR
KSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERDRERRS
KGLPQIKAETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVH
RQDANRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDL
ESFCEGGMLDNETLSPEWKGITKKSENEVAQNGGAEAAHNEPVSPIPKALPVPIPVPMPA
PITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPLHL
PPGFLPPGPPPPITPPVSVPHTPAVNIPNSTAAGGNEDTSKESSVGNPIPTVVSGGRGNA
ESTDASKMYGTVPPPVAPTNVPAPVTQAVPLLGTQGVAPPPPAPVVGLQTPSTGLLGARP
GLIPLQRPPGMPPPPLPRFPMMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPPGH
FVRPGGGPGGGGPGGGPEENRDGRQFRNDRQYTPNRDQERFGRRSFGNRAENDRERYGGR
DEREHERPGGRDRRDWGRRSPERDRHRDSEDRNRRSSGHRDRERDSRDRESRRDKEETRG
KEKPEVTDRAEGDKNHEPHGSKAEGVELVSELAAGDAELAGAKPAPESEPEATSSLEQAD
KDTGSAAEAPR
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaacgccttcaaccaagagctcttctcactgatggagatgaaacctcct
atttcccgagcaaagatgattctcatcacaaaagctgccattaaagctattaagctctac
aagcatgttgtccagattgtggagaagtttatcaaaaagtgcaagccggagtacaaagtc
ccgggcttgtacgtcatcgactccatcgttcggcagtcccggcaccagtttggaacagac
aaggacgtgtttgggcccaggttctcgaagaatattactgccacattccagtatttgtat
ctgtgtccatctgaagacaagagtaaaatagttcgtgtcctgaacctctggcagaaaaat
ggagtatttaaaattgaaatcattcagcctctcttggatatggcagcaggaaccagtgcc
actgcacccatggcagagaatgctactaacaatgaaggttcgccgccccctccggccaag
gttccctcagagcccccgccagtgacggcgaactccgtgcccagcgtgccacagctgccc
agctctgatgcctttgcagctgtagcccagctgttccagacaacacagggacaacagctc
cagcaaatcttgcagaccttccagcagcctcagaagccccagtcaccggtcatagacaac
actgtgatggctcaggttcaagctattactgctcagctgaaaaccacagcagcacagcct
ccagagcagaaagctgctttcacagcacctgagcagaaaacatcatttgacaaaaagctg
ctagatcggtttgactatgatgatgaaccagaagcagtggaagattcaaagaaagaagat
tcagctccttccccttcagtatctcagccggctttgacctctctctcattcagtgcacag
gctggatggtgctcaatgccgggtgggtttccaggagaaggcatgcaacagccagtgttt
cctcagctcccaaatatggatccttttcagcagcggatgatgggaatgcagcaggatcca
atgcggcaccaggtgccgcttcctccgaatgggcagatgccaggctttggtctcctgcct
accccgcagttcccacccatagctcagccagtgatgcctccagcagcaccagtgcagcca
accttccagtctcccttcccagtccaggctgaaccacacctgcagaaaccccaccagcag
gatatggaagtggaacagccacccattcaggagggaaaacggcatgtttctgacaatagg
aaatcaagatctagatctgcatcaaggtcccccaagaggagacgctcgcggtcgggttcg
cgctcccggcgctcgcggcaccgccgctcccgctcgcgctcccgggaccggcgccggcac
tcgcccaagtcccgctcccaggagcggcgtgagcgtgagcgggacagggagcgccgctcc
aagggcctgccccagatcaaggcagagaccgtcagtgtttgcagtaccacactctgggta
ggacagctcgacaaaaggacaactcagcaggatgtgggaagtctcttggaggagtttggc
cccattgagtcgatcaatatgataccgcccagaggatgtgcctatattgtcatggtgcac
agacaagatgccaacagagccctccaaaaactgagccgaggcaacttcaaagtcaaccag
aaatccatcaagattgcctgggctctgaataaaggaataaagccagactacaagcagtat
tgggatgtagaactgggtgtgacttacataccatgggacaaagtcaaacctgaagatctg
gaaagtttctgtgaaggaggaatgctggacaacgagacccttagtccagaatggaaggga
attaccaagaagtctgagaacgaagtggctcagaatggaggtgcagaagctgcacacaat
gaaccagtgtcacctattcccaaagctttacctgtcccaattcctgttcccatgcctgca
ccaataacagtacctcctccacaggttcccccccatccatcagggcctcccgtggttggt
gcactccagccccctgctttcacggcacctttagggatcccccctcctggatttgcccct
ggggtgcctccgccaccaccgcctccgttcctccggcccggcttcaacccgctgcattta
cctccaggattccttcctcccgggccaccgcctcccataactcctccggtctctgtcccg
cacactccggcagtgaacatcccaaactctacagcagctggtgggaatgaggacacttcc
aaggagtcgtctgtaggaaatcccatcccaacagtagtttctggaggcagagggaatgct
gaaagtactgacgcttccaaaatgtatggcactgttccacctcctgtagcacctaccaat
gtccctgctcctgtcacccaggctgttccactccttggcacccagggcgtggccccgccg
ccgcccgcgcccgtggtggggctgcagactccgtccacggggctgctgggcgcccggccc
gggctgatcccgctgcagcgcccgccggggatgccgccgccaccgctgccgcgcttcccc
atgatgcccccgcgccacatgcccccgcacatgatgcacagagggcccccgccgggcccc
ggcggcttcgggatgcctcccccgcacggaatgaaaactcccttccctccgcccggccac
ttcgtgcggcccgggggcggcccgggcggcggcgggcccggcggcggccccgaggagaac
agggacggccggcagttcaggaacgacaggcagtacacgcccaacagagaccaggagcga
ttcgggaggagatcctttgggaaccgggcggagaacgaccgggaacgctacggcggccgt
gacgagcgggagcacgagcggccgggtggccgcgacaggcgagactggggacgccgcagc
cccgagcgcgacaggcacagggactcggaggacaggaacaggcgctccagcggccaccga
gacagggagagggattccagggatcgggagtctcgtagagacaaggaagaaacgcgcggc
aaggaaaagccggaggtgacagacagggcggagggcgacaaaaaccacgagccccacggc
agcaaagcggagggcgtggaactcgtttcagaactggctgcgggagacgctgaactcgcg
ggtgcgaaacccgcgccagagtcagagcccgaggctacctcatccctggaacaggcggac
aaggacacgggctcggcggccgaggcgccgcgctag
DBGET
integrated database retrieval system
