KEGG   Sturnus vulgaris (common starling): 106861281
Entry
106861281         CDS       T08833                                 
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
svg  Sturnus vulgaris (common starling)
Pathway
svg03250  Viral life cycle - HIV-1
svg04144  Endocytosis
svg04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:svg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106861281 (VPS4A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106861281 (VPS4A)
  09143 Cell growth and death
   04217 Necroptosis
    106861281 (VPS4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svg04131]
    106861281 (VPS4A)
   03400 DNA repair and recombination proteins [BR:svg03400]
    106861281 (VPS4A)
Membrane trafficking [BR:svg04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    106861281 (VPS4A)
DNA repair and recombination proteins [BR:svg03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    106861281 (VPS4A)
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_14 AAA_22 AAA_16 AAA_5 AAA_25 RuvB_N IstB_IS21 AAA_17 AAA_18 DUF815 AAA_2 AAA_33 nSTAND3 RNA_helicase AAA_24 PhoH ResIII YCII AAA_28 Mg_chelatase NACHT AAA_7 Parvo_NS1 SLFN-g3_helicase bpMoxR YhdB DUF5906 AAA_30
Other DBs
NCBI-GeneID: 106861281
NCBI-ProteinID: XP_014745044
LinkDB
Position
Unknown
AA seq 437 aa
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
MQYLDRAEKLKEYLRSKDRHGKRPVREAQNYNKGSDSDSEGENPEKKKLQEQLMGAIVME
KPNVRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNSDGILVLGATNIPWVLDSAIRRRFEKRIYIALPDEAARA
QMFRLHLGNTPHSLTDANIQELARKTERYSGADISIIVRDALMQPVRKVQSATHFKKVCG
PSRTTPGALVDDLLTPCSPGDPGAIEMTWMEVPSDKLMEPIVCMSDMLRSLATTRPTVND
EDLLKVKKFTEDFGQEG
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgacaacgtccaccctgcagaaggccatcgacctggtcaccaaagccactgaggaggac
aaggccaagaactacgaggaggcattgcggctgtaccagcacgccgtggagtacttcctg
cacgccatcaaatatgaggctcatagcgacaaggccaaggagagcatcagggccaagtgc
atgcagtatctggaccgggcggagaagctgaaggagtacctgaggagcaaggacaggcac
ggcaagaggcctgtcagggaagcacagaattacaacaaggggagtgacagtgacagcgag
ggcgagaaccctgagaagaagaagctgcaggagcagctgatgggtgccatcgtgatggag
aagcccaatgtgcggtggaatgacgtggctgggctggagggagccaaggaagccctgaag
gaggccgtaatcctgcccatcaagttcccacacctgttcacagggaagcgcacaccctgg
cgagggatcctgctctttgggccgcctggcacgggcaagtcctacctggccaaggctgtg
gccaccgaggccaacaactccaccttcttctctgtgtcatcctctgacctgatgtcgaag
tggctgggggagagcgagaagctggtgaagaacctgtttgagctggcgaggcagcacaaa
ccctccatcatcttcatcgatgaggtggactctctgtgtggctctcgcaatgagaacgag
agtgaggcagctcggcgcatcaagaccgagttcctggtgcagatgcaaggagtgggaaac
aacagcgacgggatcctggtgctgggtgccaccaacatcccctgggtgctggactcagcc
atcaggagaaggttcgagaagaggatctacatcgccttgcccgacgaggcagcgcgggcc
cagatgttccggctgcacctggggaacaccccgcactccctgaccgacgccaacatccag
gagctcgcccgcaagaccgagcgctactcgggggccgacatcagcatcatcgtgagggac
gccctgatgcagcccgtgcgcaaggtgcagtcggccacacacttcaagaaggtctgtggc
ccctcccgcaccacccccggtgccctcgtggatgatctcctgacgccatgctcgcctggt
gaccctggggccatcgagatgacctggatggaggtgcccagtgacaagctgatggagccc
attgtctgcatgtcagacatgctgcgctcgctggccaccacccgccccaccgtcaatgat
gaggatctcctcaaagtgaagaaattcacggaggactttggacaggaaggttga

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