Sturnus vulgaris (common starling): 106861340
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Entry
106861340 CDS
T08833
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
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]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106861340 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106861340 (EXOSC7)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106861340 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
106861340 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106861340
NCBI-ProteinID:
XP_014745139
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MASVVLSEAEKLYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTGGSARVKLGETDILV
GIKAEMGTPKLEKPDEGYLEFFVDCSSNSPELEGRGGEELGTDIANTLYRVFSCENSVDL
KSLCINPKEHCWVLYVDVLLLECGGNIFDAISIAVKAALFNTRIPKVRVLEDEEGTKEIE
LSDDPYDCIRLNVDEVPCIVTLSKIGYRHVVDATLQEEVCSLASLLISVTSKGAITSMKK
VGKGSLDPESIFEMMETGQRVGKSLHIALQKILDEEESLGTSRPKVGFLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggtgctgagcgaggcggagaagctctacatcgtgcacggcgtccaggaa
gaccttcgtgtagatggtcgaggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcgaacacaggtggatctgcaagagtaaagctgggagaaactgatatcttggta
ggcataaaagctgaaatggggacaccaaagctggagaaaccagacgaaggttacctggaa
ttttttgttgactgttcttcaaattctcctgagttggaaggccggggaggagaagagctt
ggcacagatatagcaaatactctgtacagagtattcagctgcgagaacagtgtagacttg
aaatccctttgtattaatcccaaagagcactgctgggttctctatgtggatgtattgtta
ctggaatgtggtgggaacatctttgatgcaatctctatcgcagtgaaggcagctctcttt
aacacaagaatacccaaagtgcgtgttctggaggatgaagaaggcaccaaagagattgag
ctctctgatgatccttatgactgtatacgacttaatgtagatgaggtgccctgtattgtc
acactaagcaaaattggatataggcacgtggtggatgctacccttcaggaagaagtctgt
tctttggcaagcctgcttatttcagtgaccagtaagggtgccatcacttctatgaagaag
gtggggaaaggtagcctggatcctgagagtatttttgaaatgatggagacaggacaaagg
gtaggcaagtcacttcacatagcccttcagaagattttggatgaagaagagagtttgggg
acttcacgaccaaaagttggatttctaggatga
DBGET
integrated database retrieval system
