Sturnus vulgaris (common starling): 106861751
Help
Entry
106861751 CDS
T08833
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03013
Nucleocytoplasmic transport
svg05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106861751 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
106861751 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106861751 (NUP98)
03036 Chromosome and associated proteins [BR:
svg03036
]
106861751 (NUP98)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106861751 (NUP98)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106861751 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ZapB
Motif
Other DBs
NCBI-GeneID:
106861751
NCBI-ProteinID:
XP_014745849
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSTNNTGSLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGSLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTSTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGATTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLSSSNLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRQDGEEEEEPHEVTRFYTNPIAKPIPQSPEGG
GHKSPPGLDDTIVALNMRNGLEGSSEDASFHDDSLHDDWDKEAEPGQQLHPAGIVLTRAG
YYTIPSLEELARLTNDRKECIVTDFTIGRRGYGSIYFEGEVNLTNLNLDEIVHIRRKEVI
VYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLEAVSRRQG
ARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEDHPSKVDTKKLKTTPVPPPGHLAPQQM
ALNGKPAPPAQPPELEQLGRVVELDSDMADITQEAAQEALAEDTLAEEQEAVPASTHIAS
SQGINPYVLQIMKASLLADDDDLDLILDYPGKHPVKMDTSQEICSPRLPISKSQGQKRHT
VAGLLQSRFASLLCQAPGAAVAEPKAPRTEGSPGSAAPWSPLASAFPVPAAVPEAQVRTV
GARRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPDWTLVNCGDQLSGSSEVEDA
QLEPVEYGFLPTPTAPKSLTESPFKVHVEKLSLEQWKMDRDKELYLTPLEIKLKHSTVHM
DEPCPLLAPNPGVSAIHDYADWARNASEDPTMAESVVKHWCLAWTLCEAIWGKLKELEAS
LEEPSEYVLALERRRAFSRWLSQTAATRIDHEVALARHGSHVEAVFSCLTGKRIGEACRL
AQQAGDHRLALLLSQLAGSQPVRDLLTLQLVDWHRLHSDRFMQDERLRLFALLAGKPVWQ
LSERISVNVCSLLDWKRCVAVHLWYLLPPTASISRALAMYEAAFQNTSECEKYACCPLPP
YLEDSGCVIEEDDNGGRPLRDVCFHLLKLYSDRSYELDQLLDPRSVTSDPLDFRLSWHLW
EVLRALNYCHLSQQSWGVLNTSYAAQLESQGLWEWAVFVMLHEPDTHIREQAVRELLGRH
CALADSPESWAKETFLTQRLCIPPHWIHEAKAVRARMEGDKHKEALFLFKAGHWNQCHKL
VVRHLASDAIINENYKYLKGFLEDLAPPERSALIQDWELAGLVYLDYIRVNEMLDRIQQL
DVSTYELERLHTKVTSLCNRIEQLRCHNAKDRLAQSDMAKRVANVLRVVLSLQQGPEAGP
EPAEPRVPLRLLAPHIGRLPMPEDYALEELRGLTQAYLRELALATH
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggaactccttttggaggcagcaccggctttgggacaacttca
acttttgggcaaaatgctggctttggtacgaccagcgggggagccttcgggacatcggcc
ttcggctccaccaacaacaccggcagcctcttcgggagcacacagacaaagccaggaggc
ttgtttgggtcaaccacgttcaaccaaccagccacctcctccaccagcactggctttggc
tttggaacatccactgggacatcaaacagcctctttggaaccaccagcactggtgggagc
ctcttctcatcccagaataatgcctttgcccagaacaagccagctggttttggaaacttt
ggtacgagcaccagcagtggagggctctttgggaccaccaacaccacttccaaccccttt
gggagcacatctggctctctctttggcccaaccagctttactgctgctccaactggcacg
actattaaatttaatcccccaacgggcacggacaccatggtgaaatcaggcgtgagcacc
aacatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaaatccctc
gaggaactccgtttggaagactaccaggcaaacaggaaagggcccacaaatcctgtagga
gcaggagcaactgctggcttgtttggctcttccactgccacgtccagcacagccactgga
ctttttggctcttccactaccaatacaggcttttcctatggacagaacaaaactgctttt
ggaaccagtaccaccggctttggcacgggcaccaccgggggcctctttgggcagcagtcc
cagaccacgagcctgttcaacaaaccctttggccaggccaccaccacacagaacactggc
ttctccttcgggggcaccagcaccctgggccagcccaacaccagcaccatgggtctcttt
ggggtcacccagccctcgcagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacgggaactggcctttttggacaagccaacacaggatttggtgtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggagccaccacgaccagcgct
ccctcgttcggtaccaccacgggcgggggcctcttcggttttggtgccaacactgctgga
aatagcttgtttggaaataagcctgcaactgggactctgggcactggacttggaacaggg
tttggaacagctctgggggcaggacagacatccttgtttgggaacacacagcccaagctg
gggggaacgctggggacgggagcgttcggagcgccgggattcaacacctccactgccacc
ctgggctttggggcccctcagcctgctgtagctctgacagaccccaatgcctctgcagcc
cagcaagctgtcctccagcagcacctcaacagcctgacctactcaccctttggggactcc
ccactcttcagaaaccccatgtcagaccccaagaagaaggaggagaggctgaagccaacc
aacccagcagcccagaaggccttgaccacccccacccactacaagctgaccccacgccct
gccaccagggtgcggcccaaggcgctgcagtcggcgggctcggccaagtcccagctcttt
gatgggctggatgatgatgagccctccctgtccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctgagcagcagcaacctgttctcccccgtgagccga
gagaacgaggacctggcgtcaccatcagagtacccagagaatggggacaggttcttcctg
tcggtgcctcccgaggagaaccaccggcaggacggagaggaggaggaggagccgcacgag
gtgaccaggttttacaccaaccccatcgccaagcccatcccgcagagcccggagggcggc
ggccacaagagccccccggggctggatgacaccatcgtggctctcaacatgcgcaacggg
ctggagggcagcagcgaggacgcgtccttccacgacgactccctgcacgacgactgggac
aaggaggccgagcccgggcagcagctgcaccctgcggggattgttctgacacgagctggc
tactacaccatcccttccctggaggagctggcccggctgaccaacgacaggaaagaatgt
atcgtgacagacttcaccatcggccgcaggggttatggatcgatttatttcgaaggagaa
gtaaatctaacaaacttaaacctggatgagatcgtacatatccggagaaaagaagttatt
gtttaccctgatgatgaaagaaaacctcccattggggaagggttaaacaggcgggccgag
gtgaccctggacggggtgtggcccacggacaagacgtcgcggtgcctgatcaagagcccg
gagcggctggcggagatgaactatgagggccggctggaggccgtgtcccggcgccaggga
gcgcgcttcaaggagtaccggcccgagaccggctcctgggtgttcaaggtagcacacttt
tccaaatatggcttgcaagattcagatgaggaagaagaagatcatccttcaaaagtggac
accaagaagttaaagaccacgcctgtgccacccccagggcacctggcaccccagcagatg
gctctgaacggcaaaccagcgcccccagctcagcccccggagctggagcagctgggcagg
gtggtggagctggacagtgacatggcagacatcacccaggaggccgcccaggaggccctg
gctgaggacaccctggctgaggagcaggaggcagtgccagcatccacacacatcgcatcc
agccagggcatcaacccctacgtgctgcagatcatgaaagcttccttgcttgctgatgac
gatgacctggatctgatcctggattatcctgggaagcatcctgttaagatggacacttcc
caagagatctgctccccaaggcttcccatttcaaaatcacaaggacagaaaagacacaca
gttgctgggctgctgcaatccaggtttgccagcctcctttgccaggctccgggtgcagct
gtggcagagcccaaggccccgaggacggagggcagtcccggcagcgctgccccctggtcc
ccgctggcctcggcgttcccggtgcccgcggccgtgcccgaggcgcaggtgaggacggtg
ggggcgcgccggcagcgcgggctcgtccccctggagagatccatcacctacggcaagggg
aagctcctcatggacatgggactcttcatgggccgctcgttccgcgtgggatggggcccc
gactggacgctggtgaattgtggggatcagctgagcggctcgagtgaggtggaggatgct
cagctggagcccgtggaatacggattccttccgactcctactgctcccaaatcactcaca
gaatcccctttcaaagttcatgtggaaaagttgagcttagaacaatggaagatggacaga
gacaaggagctgtatctcacccccctggagataaagctgaagcacagcactgtccatatg
gatgagccctgtccactcctggcccccaaccccggggtctctgctatccatgactatgct
gactgggccaggaacgcatctgaggatcccactatggcagagagcgttgtgaagcactgg
tgcttggcctggacgttgtgtgaggccatttggggcaagctgaaggagctggaggccagc
ctggaggagcccagcgagtacgtgctggctctggagcgccgcagggcgttctcgcgctgg
ctgtcccagactgcggccacacgcatcgaccacgaggtggccctggcccggcacggcagc
cacgtggaggccgtgttcagctgcctcaccggcaagaggattggcgaggcctgcaggctg
gcacagcaggcaggtgaccaccggctggcgctgctgctgtcgcagctggccgggagccag
cccgtgcgggacctgctgacgctgcagctcgtggactggcaccgcctgcacagcgaccgc
ttcatgcaggacgagcggctgcgcctgttcgcgctgctggccggcaagccggtgtggcag
ctctcggagaggatcagtgtcaacgtgtgctcgctgctggactggaagcgctgcgtggcc
gtgcacctgtggtacctgctgccccccacggcctccatctccagggccctggccatgtac
gaggcagccttccagaacacctcagagtgtgaaaaatacgcctgctgtcctctgcctccc
tacctggaagattctgggtgtgtcattgaagaggatgacaatggaggaaggcccctgaga
gatgtctgcttccatttgttaaagctctacagtgacaggtcctatgagctggaccagctg
ctggatcccaggagtgtcacctctgacccgctggatttccgcctcagctggcacctgtgg
gaggtgctgcgggccctgaactactgccacctgtcccagcagagctggggggtgctgaac
accagctatgctgcccagctggagagccaggggctgtgggaatgggccgtgttcgtgatg
ctgcacgagcctgacacacatatccgtgagcaggccgtgcgggagctgctgggccggcac
tgtgccctggctgacagccccgagtcctgggccaaggagacgttcctgacacagcgtctc
tgcatcccccctcactggatccacgaggccaaggctgtgcgggccaggatggagggagac
aagcacaaagaggcccttttcctgttcaaggctggccactggaaccagtgccacaagctg
gttgtcaggcacttggcctcagatgcaattatcaacgagaactacaagtacctgaaggga
ttcctggaggacctggcacccccggagcgcagcgcactcatccaggactgggagctggca
gggctggtctacctcgactacatccgtgtcaatgagatgctggacaggattcagcagctg
gatgtttccacctacgagctggagcggttacacaccaaagtgacatccctgtgcaacagg
atagagcagctgcggtgccacaacgccaaggaccgcctggctcagtcagacatggcgaag
cgtgtggccaacgtgctgcgggtggtgctgagcctgcagcagggccccgaggcgggcccc
gagccggccgagccgcgcgttcccctgcggctgctggccccgcacatcggccgcctgccc
atgcccgaggactacgcgctggaggagctgcggggcctcacccaggcctacctgcgtgag
ctggccctggccacgcactga
DBGET
integrated database retrieval system
