Sturnus vulgaris (common starling): 106861761
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Entry
106861761 CDS
T08833
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
svg04515
]
106861761 (DCHS1)
Cell adhesion molecules [BR:
svg04515
]
Cadherins
Cadherin related
106861761 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Fibulin_C
RET_CLD1
Cadherin_4
PepSY
Sharpin_PH
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
106861761
NCBI-ProteinID:
XP_014745862
LinkDB
All DBs
Position
Unknown
AA seq
3266 aa
AA seq
DB search
MEQMKRSTMLLLELLILGGLRAGMGSAVLGTLDLQIDEEQPAGTIIGDISAGLPPETSAY
MYFISAQEGSGVSTDLGIDENTGIIKTARVLDRETRDHYSFIAVTPEGITVEVNIQVNDI
NDHAPAFPKQHSTFQIPEHTPIGSRFPLDPAFDADSGLLNTQGYMIKGGNVGQAFRLETR
RGPNGVLYLDLVVSNILDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFN
QSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDARTGVIKL
NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS
EGAQPGQYVARISVSDPDYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERD
SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTA
RDKDQGPNGEVRYSILHGRDTHSNWFTIDPATGIITTAAPLDYEKDPQPQLTVLATDRGT
PALSSSAVVHVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDADSGAFGSLSY
SIGSGIGSVVPTQFSIDKHSGQLCTVQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFL
EDTNDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPLFSL
NKDTGVISLSWSLSGKANTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFEQAQY
FFTVPEDMPQGASVGAVQAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRTSLPLDHE
SQSVLILDVQARSGSPPAYSNTRVKISVSDVNDNAPAFPTPSDSILLPEATEPGTTVYTV
QAEDRDSGANGQVTFELLSGGEGTFVVERASGAVRLLGALQYEAISAYSLAIMARDSGIP
QLSSTFTLLVHVQAEDDNGPIFDTLTYRVEVQEGVPVSTRFLQVRALAHDVESTALTYHL
RADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVLASVGGTGAAADTRKTGTSTVRIS
ITDENDNSPRLSEERYFFTVSENQAPGSSVGRVMASDRDAGQNSRLTYRLLQHDPNFLIH
TQTGEVSTKHSLDREQQSSFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSG
QELTVQVLEEKPSGLLVASLQAKDPDEGENGTIIYSLIGAWAERFTLHVATGELRTATVL
RRADRAEYIFTVTASDRGAVPRSTSAIVRVQVLPSSRVLPRPDATVLTLHPLEGVKPGSV
IGSVAPPDAPARGQLIYTVVGGGGDGTFVVDSMTGEIYAARELDYETGARHVLQVSAEDT
QHGYPSSRLVLVQIHVQDCNDQAPTFPEDPITIVVPENAQAGSSIFTFQALDGDGVGPNS
QVRYALLHLEPPGAPFQLDSRSGQLTLRQGLDREAAASFLLVVGATDQARNVSQRRSAAV
TARVFVTDENDNAPVFLSPATVSVMEDQPTGFVALHVVAQDSDLGENGRVSYSLRAGNSD
GRFHLNPSTGALSIVRALNREEVAQHNLTVVATDHGFPRLSATQLLSVLVLDVNDEAPAF
EKPEYEAHIMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTRPL
DREEQEQHVLTIYARDAGLPPSLTKATVWITVGDENDHAPHLESKSCSVEVPENQSRVAL
YTLRATDPDGGENGRLEYRLTGGDPGQDFSLDPVSGVLSTAHALDREQIASYSLIVVVQD
HGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPEDLPVGALVLQLVAEDPDEGTNGQ
MSYYLGNESLGMFQVEPQSGRIRSTQALDRERQPTYSFLAKAVDSAPWEPKSTAVRVTVV
VRDVNDHVPAFLHSPLTVNLSRHTPLKQVVATMRAEDRDAGANASILYRFATPSSAFAIN
SYTGDIQLLQPLGSLSQRQRTLFVLAMDLGQPALSSTGVVVIHVQEEPYRGLRFPRSTRD
VALAENAAPGTEVASVQAMHTGGSSGHITYSIISGNERNTFLIQPSSGAISVRDSSSLDF
EASPRLRLVIQAETAASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVL
ADDLDQGANGQVTYAINQSLPMPGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGT
PPLMGSATLTVVVMDINDNSPTIPVPWEIRVPENTLLGTQIAQLTGNDVDSGPALSYTLL
LEGDTADTFGVLRYGGHIALTGPLDHEQRSRYTLTLRASDTRHETEANLTVLVEDVNDNV
PTFTQVFYQVLLPEHTPAGSVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTLFT
TRQVEFNASQPTLDLVVEARDHGSPSLSSWATVQLQVLDVNDHSPRFQEPCYNASVPEDL
RPGTTVLTLEAGDADLSRENAGFDYTIVSGNSGNAFQVESRVARAGGQLRTQGALVLVES
LDFEAIPVYNLTVAASDRGLPQRSATVPVLITVQDVNDNPPVFTRAEYRAAVSEAALPGT
ELLRVAAHDADSGPRGHVHYTISSGDQHGLFQLHESTGALSLVRPLDREAQALHTLVVRA
TDTPGGHFALVPVAIEVKDINDNKPYFPVEVLSASIRENLPPGTLVTTLRAVDADTGAFG
ELRYVVLEQALGDPTMGDGRDAFAVNGSSGELRSRLTFDYERAKAFQLLVRATDAGNASA
TVTVRVLVTGEDEYDPIFLSPSFNFEVPEGARKGQSIGRVLATDEDEGADGVVLYTLAKP
SPYFAINQTTGSIYLRVDSQPQAGAGRTKREPREMSLEVQARSPLPTSRVASAQVTIDVT
HTSFGLAPDLNLLLVAVAASLGVVVVLAAVAIVLALVRSRQRRGHKKAEGEGALARAQSG
SLQKLGREEPALPGAEHIYHQALPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR
MINEYPRVASITASMQEHIAARGPDSGIQQDADQLSDISCEPAALESTQWFKSKKGSGLL
LPGPPLQLYREDGGGSAFLGVRCGLSVSSQPQDYAFPEDGKPSVEGSLTAIVASDEELRG
SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKPRIDPPPLITSVAH
PGAKSVPPKPPPGRTFPHSSSLRRSPISHEGSISSSAMSPSFSPSLSPLAARSPVVSPFG
ISQGPSTSTISAEHSLEPPEEAELRI
NT seq
9801 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaatgaagaggtcaacaatgcttctgctggagctgcttattcttgggggcctg
cgagcagggatgggctctgctgtcctgggcaccctggatctacaaatagatgaggagcag
ccggctggcaccatcattggggacatcagtgctggcctaccccctgaaactagtgcctac
atgtatttcatctcagcacaggagggcagcggcgtctccactgacttggggatagatgag
aatactgggatcatcaaaacagctcgtgtcctggaccgggagacacgggaccactacagc
ttcattgctgtcaccccagagggcatcacggtagaagtgaacatccaagtgaatgacatc
aatgaccatgccccagcgtttcccaaacagcacagcacctttcagatcccagagcacaca
cccattggcagcaggtttcccttggacccagcctttgatgctgacagtggcctcctgaac
acacaaggctatatgattaaaggagggaatgtggggcaggccttccgcctggaaacgcgc
cgaggacccaatggggtcctgtatttggacctggtggtcagcaacattctggatcgggag
aaccgttcatcatactcactgctgttggaagcctacgatggtggttctcctccccggagc
acccagatgacactggatgtgtccattcaggacatcaacgacaatgcccccagcttcaac
cagagccgctatcatacacttatttcagagaacctgaaacctggcagcagcatcctgcag
gtctttgcctctgacgcagatgaaggtgacaatggggatgtgatttatgaaatcaaccga
cggcagagcgatcctgaccagtacttcaccatcgatgcccggactggagtcatcaagctc
aacaagggtctggactatgaagtgaggaaggtgcacgagctggtggtgcaggcaagggat
aaggctgtccatcctgaggtcactacagcctttgtcactatccatgtgcgtgactacaat
gacaaccagcccaccatgactatcatctttctgagtgaggatggctccccacagatctct
gagggagcccagcccggacagtatgtggcacgtatttctgtgtccgatccagactatgga
gagtactccaatgtcaatgtcacactggagggaggagatggcaagtttgccctcactacc
aaggacaacattatctatctcatctgtgtggaccaacttctggatcgggaagaaagagac
tcctatgatctgcgggtgacagctactgactcaggaacacccccgctccgggcagaatca
gcctttgtgctgcaggtgatggatgttaatgacaacccccctctctttgaccagcaggag
tacaagcaaagcatccctgaggtggtgtacccaggcagctttgtcctgcaggtgacagct
cgtgacaaggaccagggtcccaatggggaggtgcggtacagcattctgcatggccgtgac
acccactccaactggtttaccattgaccctgccactggcatcatcaccactgctgcccca
ctggattatgagaaggaccctcagcctcagctcactgtgctggccacagaccggggaacc
cctgccctctcttcctcagctgtggtgcacgtggccttgcaggatgtcaatgacaatgag
ccagtgttcaggagtaacttctacaatgtgtccctgaaggagaacacccctgttgggacc
tgcttcttgcaggtgacagccacagatgcagacagtggtgcatttggctccctttcctac
tccattggctctggcatcggcagcgttgtgcccacacaattcagcattgacaagcactcg
gggcagctgtgcacggtgcagcccctggaccgtgatgagggcacatctgcctacgacttc
accatcactgctgtggatgggggcggcctgaactccatggtgtatgtgaaggtgttcctg
gaggatacaaatgacaaccggccagtgttttacccgctggagtacgctgccagcatcagc
acacagagcatgccagggacagctgtgctgcgtgtcaccgcccacgacaaggacgagggg
ctaaacgggagagtgacgtaccgcatcgtcctgggaaactctcccccactcttctccctc
aacaaggacacaggtgtcatctctctatcatggtctctgagtggcaaagccaacacactg
gtgcagctggtgatttctgctcaggatggggggggcctgcaggcacagccaaatgcccgg
gtaaacatcagcatcgtggagggcacagtgtcaccccctgtctttgagcaagctcagtac
ttcttcaccgtgcccgaggacatgccacagggtgccagtgtcggggctgtccaggcccag
aaccctccaggtcatgctgatgacatcttttattccatctcctcgggggaccctcacggc
tatttctccatcgactcagcctcggggcagctccgcaccagcctgcctctggatcacgag
tcccaatctgttctcatcctggatgtccaggcccggagcggttcaccccctgcctacagc
aacacacgtgtgaagatctccgtatcagatgtgaatgataacgcgccagcattcccaact
ccctccgactccatcttgctgccagaggccacagagcctgggactacagtctacaccgtg
caggccgaggaccgtgacagtggtgccaacggacaggtgacctttgagctgctgtcgggg
ggtgagggcaccttcgtggtggagcgtgcctcaggggcagtgcggctccttggggccctg
cagtacgaggccatctcggcctacagcctggccattatggcccgggacagtggcattcct
cagctcagctccacgttcacgctgctggtgcacgtgcaagctgaggacgacaacggaccc
atctttgacactcttacctaccgtgtggaggtgcaggagggtgttcccgtatccacccgc
ttccttcaggtgagggccctggcacacgatgtggaatccacggcccttacctaccacctg
cgggcagatggggacgctgccagcttcggcattgtgcccgagagtggctggctgtacgtc
aagagcgccctggaccgggagacgcgggacttgtatgtgctgacggtgctggcctcggtg
ggaggcaccggggctgcagcagacacacggaaaaccggcaccagcaccgtgcgcatcagc
atcactgatgagaacgacaacagccctcggctgagcgaggagcggtacttcttcaccgtg
tctgagaaccaggctcctggcagcagtgtgggaagggtgatggcgagtgaccgggatgcc
gggcagaacagccggctcacctaccgcctgctccagcatgatcccaactttcttatccac
acacagacaggagaggtcagcaccaagcacagcttggatcgggagcagcagtccagtttc
cagctcctggtgattgttcaggatgggggagcaccaccccgcagtgccactgggaccatc
tatgtcactgtgctggatgagaatgacaacgctcctgctttcctccacgtgggcagtggt
caggagctaactgtgcaggtgctggaagagaagccatcgggactcctggtcgcctccctg
caggccaaggaccctgacgagggggagaatgggaccatcatctactcactgataggagcc
tgggcagagcgtttcactctgcacgtggctaccggagagctgcgcacagccacagttctg
cgccgggccgaccgtgccgagtacatcttcacggtgacagccagcgaccgcggcgcggtg
cctcgcagcacgtcagccatcgttcgtgtgcaggtgttgccatcctcccgcgtactgcca
cggcctgatgccaccgtgttgaccctgcatcctctcgagggggtcaagccggggtctgtg
attggttcagtggctcccccggacgcccctgcacgaggacaactgatctacacggtggta
ggaggtggtggggatggcacctttgtggttgatagtatgacaggggagatttatgctgcc
cgtgagctggactatgaaactggggcgcggcacgtgctccaggtgagtgctgaggacacg
cagcacggctatccctccagcaggttggtgctagtccagatccacgtgcaggactgcaat
gaccaggcacccaccttccccgaagaccccattaccattgtggtgcctgagaatgcccag
gctggctcctccatcttcaccttccaggcgctggatggggatggagtgggccccaacagc
caggtgcgctatgctctgctgcacctggagccacccggagccccctttcagctcgacagc
cgctcggggcagctgaccctgcgccagggcctcgaccgggaggctgctgcctccttcctg
ctggtggtgggggccacggaccaggcccgcaacgtcagccagcgccgctcggccgccgtc
acagcccgggtgtttgtgaccgacgagaacgacaacgcgcccgtcttcctctccccggcc
accgtcagcgtcatggaggaccagcccacaggcttcgtggcactgcacgtggtggcccag
gacagcgacctgggggagaatgggcgtgtcagctactccttgcgagcaggcaacagtgat
ggccgcttccacctcaaccccagcactggtgcactctccatcgtgcgggccctgaaccgg
gaggaggtggcacagcacaacctgacggtggtggccacagaccacggcttcccccgcctc
tctgccacacagctgctgtccgtgctggtgctggacgtcaatgatgaggctcctgccttt
gagaaacctgagtatgaagctcacatcatggagaacctgccggctggcagcccagtgctg
caggtgctggccacggaccgagacctgggtgccaacgggcaggtgtcctatgggggtctc
tctggggggccgttctccatccacccacagacggggctcattgtaaccacgcgtcccctg
gaccgggaggagcaggagcagcatgtgctgacaatctatgcgcgggatgccggcctgcca
cccagcctcaccaaggccacggtgtggatcacagtgggggatgagaatgaccatgcaccc
cacctggagagcaagtcctgctccgtggaggttcctgagaaccagagtcgtgtggcactc
tacaccctgcgggccactgatcctgatggtggggagaatgggcgcttggaataccggctg
acaggtggagaccctgggcaggatttcagcctagaccccgtctctggtgtcctctccact
gcacatgccctcgaccgagagcaaattgcttcctacagcctcattgtggtggtgcaggac
catggctcccccccacgcagtgccaccatgtcggtgactgtgcaggtgttggacctcaat
gacaatgcacccagttttgctcaggccagctacacagtggaggtgccagaggacttgccg
gttggtgccctggtgctgcagctggtggctgaagatccagatgagggcaccaatgggcag
atgtcctactacctgggcaatgagtcgctgggcatgttccaggtggagccacagagcggg
cgcatccgcagcacccaggcactggaccgggagcgccagcccacctacagcttcctggcc
aaggcggtggactcagcaccatgggagcccaagagcacggccgtgcgcgtcactgttgtg
gtgcgagacgtcaacgaccatgttccggccttcctgcacagcccgctcacggtcaacctg
tcccgccacacaccgctcaagcaggtggtggccaccatgagggccgaggacagggacgcg
ggtgccaacgcctccatcctgtaccgctttgccacccccagctccgcctttgcaatcaac
tcctacacgggggacatccagctgctgcagccccttggctcactcagccagcgccagcgg
acgctcttcgtgctggccatggacctggggcagccagcactctcctccacaggcgtagtg
gtgatccacgtccaggaggagccctaccgggggctgcgctttccccgcagcaccagggac
gtggccctggctgaaaatgccgccccaggcactgaggtggcgagtgtccaggccatgcac
acggggggctcctcggggcacatcacctacagcatcatcagtggcaacgagaggaacacc
ttcctgatacagcccagctcaggtgccatctcagtgcgggactccagtagcctggacttt
gaggccagccctcggctgcgcctggtgatccaggcagagactgcagcttcctttggcttt
atggccataaacctcaacctccaggatgtgaacgacaacctgccccgcttccagctgcag
aactatgtggcattcatctgggagtcacagagctatgactcacctgtcatccaggtgctg
gcagatgacctggaccagggagcgaacgggcaggtgacttatgccatcaaccagtccctg
ccaatgccgggcttgtaccacattgaccctcagactggcaccattaccactgctgccatc
ctggacagagagatctggtcccagacccgcttggtggtgacagcgatggaccgaggaaca
ccaccgctcatgggctcggccacactgaccgtggtggtgatggacatcaatgacaatagc
cctaccatcccagtcccctgggagatccgtgtccctgagaacacactgctgggcacccag
atagcccagctgacgggtaacgatgtggactcgggccctgcgctctcctacacgctgctg
ctggagggggacacggcagacaccttcggggtgctgcgctacggtggccacattgccctg
acggggccgcttgaccacgagcagcgcagccgctacaccctcaccctgcgtgcctctgac
acacgccatgagactgaggccaacctcaccgtccttgtggaggatgtgaacgacaatgtg
cccaccttcacccaggttttctatcaggtgctgctgccagagcacacacctgccggcagt
gtcatccttactgtgagtgcaaccgaccccgactcagggagcaatggggacatcaccttc
cacctggccgtgcccagccctgacgttgccattgaccccagcaatgggaccctcttcacc
acccggcaggtggagttcaatgccagccagcccacccttgacctggtggtggaagcccgt
gaccatggctctcccagcctctcatcctgggccacagtgcagctccaggttctggatgtt
aatgaccacagcccccgcttccaggagccatgctacaacgccagtgttcccgaggacctg
cgcccaggcaccactgtgctaacactggaggcaggggatgctgacctctcccgggagaat
gctggctttgactacaccatcgtcagtggaaacagcggcaacgccttccaggtggagagc
cgggtggcccgggccggggggcagctccgcacacagggagccctggtgcttgtggagtcc
ctggacttcgaggccatcccagtgtacaacttgaccgtggcagcctcagaccggggcctg
ccgcagcgcagtgccaccgtgcctgtgctcatcactgtgcaggacgtcaatgacaacccg
cccgtgttcacgcgggccgagtaccgcgcagcagtgagcgaggccgcgctgcctggcact
gagctgctgcgcgtggcagcccatgatgccgactctgggccacgtggccatgttcactac
accatcagctcaggtgaccagcacgggctgttccagcttcatgagagcacaggggccctg
agcctagtgcggccactggatcgagaggcccaggcgctgcacacgctggtggtgcgggcc
acggacacaccaggtgggcactttgcactggtccctgtggccattgaggtgaaggacatc
aatgacaataagccgtacttcccagtggaggtgctgagcgccagcatccgggagaacttg
ccccccggcacgctggtcaccacgctgcgcgctgtcgatgccgacaccggcgcctttggg
gagctgcggtacgtggtgctggagcaggcactgggggaccccaccatgggggacggccgg
gacgcctttgctgtcaatgggagctctggggagctgcgctcccgcctcacctttgactat
gagcgagccaaagccttccagctcctggttcgggccaccgacgctggcaatgcctcggcc
actgtgactgtgcgggtgctggtgacaggggaagatgagtatgatcccatcttcctgagc
ccctccttcaacttcgaggtgcctgagggcgcgcgcaaagggcagagcattgggcgagtg
ctggccacggatgaggatgagggggctgacggtgttgtgctgtataccctggcaaagccc
tcaccatactttgccatcaaccagaccacaggctccatctacctgcgtgtagacagccag
ccccaagccggggctgggcgcaccaagagggagccacgggagatgagcctggaggtgcag
gcacgcagccccctgcctacttcccgtgtggcctctgcacaagtcaccattgatgtcaca
cacacctcctttggcctggcacctgacctcaacctactgctggtggctgtggccgcctca
ctgggcgttgtggtggtgttggctgctgtggccatcgtgctggcactggtgcgctcccgg
cagcgccggggccacaagaaggcagagggggagggggcactggcccgtgcacagagcggg
tccttgcagaagctgggccgtgaagagccagcactgcccggggcggagcacatctaccac
caggcactgccagggtatgggactgagccggcggggccctacacgcggggtggctcactg
gacccctcgcattctagcggccgtggatctgctgaagccgctgaggatgacgagatacgg
atgatcaatgagtacccacgcgtggccagcatcacagcctccatgcaggagcacatcgct
gcccgcggcccagactctggcatccagcaggatgccgaccagctttccgatatctcctgt
gaaccagctgcattggagagcacccagtggttcaagagcaagaaaggctctggcctgctg
ctgccagggccacccctgcagctgtaccgtgaggatgggggtggcagcgccttcctgggt
gtccgctgtggcctcagtgtctcctcgcagccccaggactacgccttcccagaggacggc
aagccctccgtggagggctcgcttaccgccatcgtggccagcgatgaggagctccgtggc
agctacaactgggattacctgctgaactggtgtccccagttccagccactggccagtgtc
ttcacggagatcgcccgcctcaaggatgagagctccctgcgcaagcccttcccagccaag
cccaaggcagagcccaagccccgcatcgaccccccgcccctcatcacctcggtggcccat
ccaggtgccaagtctgtgccccccaagccaccaccaggcaggaccttcccgcactcatcc
tccctgcgccgctcgcccatcagccacgagggttccatttcgtcctccgccatgtcaccc
agcttctccccgtcattgtccccgctggctgcccgctcccctgtggtctcgccctttggc
atctcacagggaccatccacctccactatcagcgctgagcactcgctggagccccctgag
gaggccgagctcaggatttag
DBGET
integrated database retrieval system