Sturnus vulgaris (common starling): 106861799
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Entry
106861799 CDS
T08833
Symbol
SMARCC1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106861799 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svg03021
]
106861799 (SMARCC1)
03036 Chromosome and associated proteins [BR:
svg03036
]
106861799 (SMARCC1)
Transcription machinery [BR:
svg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106861799 (SMARCC1)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106861799 (SMARCC1)
PBAF complex
106861799 (SMARCC1)
GBAF(ncBAF) complex
106861799 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
BRCT
SpeFL
Motif
Other DBs
NCBI-GeneID:
106861799
NCBI-ProteinID:
XP_014745913
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMTIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTFGLESSCIAGTGPDEP
DRMDGAEEEKMETEAEGQAAEKVENKAESEAEEGEKVPEGENERSVEKEPEGEGTAEPKT
EEKEAEENKENVDGSKDKEAEAGKKKVEHXXXXISEGNVATAAAAALASAATKAKHLAAV
EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQL
KYAELRARQQMEQQHSQNPQQPHQHPSGPGMNPLGAPAHPGLLPHQQPPPYPMMHHQMPP
PHPPQPGQMPGPGPLMPGQPMAGRMMPAPPGMAPMAGNLLGPRVPLAAPNGMYPGPAQAP
PAEGVTPPPAGAPPASAAP
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggaggaggtttgacctgcagaatccctcccggatggatcgcaacgtg
gagatgttcatgaccattgagaaaacactggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaaa
cgtcaccagggaacagtcactgaagagaaatccaaggccacccaccacgtgtatccaagt
cctacctcaatggatgatgatgagtggttgagacctgtgatgaaaaaggacaagcaggtg
ctggtacattggggcttttttccagacagctacgacacctgggtccatgccaacgagatt
gatgcagaaattgaggatccccccattcctgagaagccctggaaggttcatgccaagtgg
attttggacactgatgtgttcaatgagtggatgaatgaagaggattatgaggtggatgag
aacaggaaatccgtgagttttcgccagaggatctccatgaagaacgaagagcccgtgagg
agcccggagaggagggacaggaaagcagcagccagcacaaggaagaggaaacattcccct
tctccaccccccacccctgtggagtccaggaaaaagacagggaagaaaggacaagcagct
ctctatgggaaaaggagggggcagaaggaagaggatgagcaggaggatctcaccaaggac
atggaggatcccaccccagtacccaacatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagtgagaacacgcctgtcaaaggaggaaccgtggcagacctggatgag
caggatgaggagacagtggccactggaggaaaggaggacgaagaccccaacaagggtgac
cagagccgctccattgaccctggggaggacaatgtcaccgagcagaccaaccacatcatc
atccccagctacgcctcctggttcgactacaactgtatccacgtgatcgagcgtcgtgca
cttccagaattcttcaatgggaaaaacaaatccaagactccagaaatatacctggcctac
aggaacttcatgatcgacacgtaccggctgaacccacaggagtacctgaccagcacggcc
tgcaggaggaacctcactggggacgtctgtgctgtcatgagggtccacgccttcctggag
cagtgggggctcatcaactaccaggtggatcctgagagccgccccatggccatggggccc
cccccgaccccccacttcaacgtgctggctgacaccccctcggggctgatgcccctgcac
atccgcaccccccaggttccagctgcccagcagatgctgagctttcctgagaagaacaag
gagaagccaactgacctgcagaactttggccttcgcacagacatctactccaaaaagact
ttggccaagagtaaaggtgcaagtgctggcagagaatggacagagcaggagacactgctg
ctcttagaggcactggagatgtacaaggatgactggaacaaggtgtcagagcacgtgggc
agccgcacccaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggacccgtac
ctggagaactcggacgcgtccctgggccccctggcctaccagcccgtgcccttcagccag
tcgggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggatccacgagtg
gcctcggccgctgccaaggctgccctggaggagttttccagggtcagggaggaggtgccc
ctggagctggtggaggcccacgtgaagaaggtgcaggaggcagctcgagcctcgggcaag
gtggatccgaccttcgggctggagagcagctgcatcgcgggcacgggccccgacgagccc
gacaggatggatggagctgaggaagagaagatggaaacagaggcagaggggcaggcagca
gagaaggtggagaacaaagccgagagtgaggctgaggaaggagagaaggtcccagagggg
gaaaacgagcggagcgtggagaaggagccagagggggaggggacagcagagcccaagaca
gaggaaaaggaggcagaggagaacaaggagaacgtggatggcagcaaggacaaagaggct
gaggctggcaagaagaaagtggagcacgnnnnnnnnnagatctcagaaggaaatgtggcc
acagctgcagctgctgccctggcctctgctgccaccaaggccaagcacctggcagccgtg
gaggagaggaagatcaagtccctggtggccctcctggtggagactcagatgaagaagctg
gagatcaaacttcgccactttgaggagctggagaccatcatggacagggagaaagaggct
ctggagcagcagaggcagcagctgctgacagagaggcagaacttccacatggagcagctc
aaatacgccgagctcagggctcgccagcaaatggagcagcagcacagccagaacccccag
cagccccaccagcaccccagtgggcctggcatgaaccccctgggggcaccagcacaccca
gggctgctgccccaccagcagcccccaccctaccccatgatgcaccaccagatgccacct
cctcacccacctcagccaggtcagatgccagggcctggccccctgatgccagggcagccc
atggcaggccggatgatgccagccccccccgggatggcccccatggccgggaacctgctg
ggaccacgggtgcccctggcagcccccaacgggatgtatcctggcccggcgcaggcaccg
cctgcagaaggagtgaccccacccccagccggagcccccccggcctcagccgctccctaa
DBGET
integrated database retrieval system
