Sturnus vulgaris (common starling): 106862391
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Entry
106862391 CDS
T08833
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106862391 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svg03041
]
106862391 (USP39)
Spliceosome [BR:
svg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
106862391 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
106862391
NCBI-ProteinID:
XP_014746845
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MSSRGRRDRDSRDARGASTSSAASSARGSSRSRRDADAERPRGRRDAERERSRREAAEAL
PVDLARVKREPGTGTGVWGDSGTAAPAAPVRVKREREPDGDSDPEPEPAVRYGRFDPEDQ
RSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQLS
HHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTAQHIAHLDKQAKLSRAYDGTTY
LPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYRRIQRPPGDIMFLLVQRFGEL
MRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVEFLSWFLNALHAALGGTKRK
KKTIVTDVFQGSMRIFTKKLPHPDLPAEEKAQLLQNSEYQERMVESTFLYLTLDLPTAPL
YKDEKEQLIIPQVPLFSILAKFNGSTEKEYKTYKENFLKRFQLTRLPPYLIFCIKRFTKN
NFFVEKNPTIVNFPITNVDLREYLSEEVQAAHAHTTYDLIANIVHDGKPSEGSYRIHVLH
HGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRREEDETNQQGA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgcgggcggcgggaccgcgattcccgggacgcccgcggggcctccacctcc
tccgccgcctcctccgcccgcggctcctcccgtagccgccgtgacgccgacgccgagcgg
ccgcggggccggcgggatgcggagcgggagcgctcacggcgagaggcggcggaggcgctg
ccggtggatctggcgcgcgtcaagcgggaaccgggcaccggcaccggcgtctggggggac
tcgggcaccgccgcccccgccgcgccagtgcgtgtgaagcgggagcgggagccagacgga
gactccgaccctgagcctgagcccgccgtgcgctatgggcgctttgatccagaggaccag
cgcagccggcactgcccctacctggacaccatcaacaagagtgtcctggactttgacttc
gagaagctgtgctccatctccctgtcccacatcaacgtctatgcctgcctcgtctgcggg
aagtacttccagggccgcgggctgaagtcacacgcctacattcacagtgtgcagctgagc
caccacgtgtttctcaacctgcacacactcaagttctactgcctgcctgacaactacgag
atcatagactcctcgcttgaggacatcacgtatgtgctcaagcctaccttcacagcccag
cacatcgcccacctggacaaacaggccaagctgtcccgggcctatgatggcaccacatac
ctgcctggcatcgtggggctcaacaacatcaaggccaatgactatgccaacgctgtgctc
caggccttgtctaacgtgcctcccctgcggaattacttcctggaggaggagaactaccgg
cgtatccagcgcccgcccggggatatcatgttcctgctggtgcagcgctttggggagctc
atgaggaagctctggaacccccggaatttcaaggcacatgtgtcaccccatgagatgctc
caggccgtggtgctctgcagcaagaagaacttccagatcaccaagcagggggatggggtg
gagttcctgtcctggttcctgaacgcactgcacgcggcgctgggcggcaccaagaggaag
aagaagaccattgtcactgacgtgttccagggctccatgcgcatcttcaccaagaagcta
ccacaccctgacctgccggcagaggagaaggcgcagctgctgcagaacagcgagtaccag
gagcgcatggtggagtccacgttcctgtacctgaccctggacctgcccacggcgccactc
tacaaggacgagaaggagcagctcatcatcccccaggtgcccctgttcagcatcctggcc
aagttcaacggcagcaccgagaaggagtacaagacctacaaggagaacttcctgaagcgt
ttccagctgacacgcctgcccccctacctcatcttctgcatcaagcgcttcaccaagaac
aacttctttgtggagaagaaccccaccattgtcaacttccccatcacgaacgtggacctg
cgggaatacctgtcggaggaggtgcaggccgcacacgcccacaccacctatgacctcatc
gccaacatcgtgcacgacgggaagccctcagagggctcctaccgcatccacgtcctgcac
catggcacagggaagtggtatgagctgcaggacctgcaggtgactgacatcctgccccag
atgatcaccttgtctgaggcctacatccagatctggaagcgacgtgaggaggatgagacc
aaccaacaaggcgcctga
DBGET
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