Sturnus vulgaris (common starling): 106862724
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Entry
106862724 CDS
T08833
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106862724 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svg03021
]
106862724 (POLR1B)
Enzymes [BR:
svg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106862724 (POLR1B)
Transcription machinery [BR:
svg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106862724 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
106862724
NCBI-ProteinID:
XP_014747398
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLCGFSPQDLMQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLVMARHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFHKEL
FFLPLGFALKALVNFPDYQIFEEVVKGREDDTFFGNCVTEMLRAVVDAGCLTQQNVLDYL
GKSFRVKLNLPEWYSNEQAADFILSCICIHLTNRTEKFYLLCMMTQKLYAFAKGECMEDN
PDSLMYHEVLTPGQLFLMFLKERLETWLQSVRFVLEKRAEKADISLNTDTLVKAFSLVPD
FTKPFEYLLATGNLRSKTGLGMLQASGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTTT
VRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVMDIPPLLCSLGVTPIDAA
PSQPYSECYRVVLDGSMVGWVERELAPEIAQTLHRFKITQEKRFPARAEVVLIPMTGKPS
LYPGLFIFTNPCRMVRPVRNLSYGRNEWIGTLEQIFMNVATMESEVVPGVTTHQELFPHS
ILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPS
MYDYFGMDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKVESIDLSLKA
SRAGDNLVFGIRPGDPNVGEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPSKE
VGIVDNVRLCSNDRGTGKFKKACITVRVPRNPTIGDKFASRHGQKGILSQLWPIEDMPFT
ENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFSEKKSALKYFGET
LVSAGYNFFGTEKMYSGISGVELEAEIFVGLVYYQRLRHMVSDKFQVRTTGPRDAVTNQP
VKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSIISPVLEKLS
HSSVTSSRRYSCSVCSKVNAIEVVPVPHVFHYFVAELAAMNIKTKLNVE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgccacagggaactatcaaacagcccttagggtatattccaatcatggtgaagtccaaa
ctgtgcaacctctgtggtttttctccacaagatcttatgcagcaccatgaggaggaagag
gaaatgggaggctactttataatcaatggcttagaaaaagtaatcaggatgctgattatg
cccaggcgaaacttccctcttgtgatggcaagacataagtggaaaaacagaggccctggt
ttcacagagtatggggttgtgatgcactgtgtcaaggatgagcatactgcaataaatatg
aaccttcactacttggaaaatggctgtgtcatggtgaatttcatttttcacaaagagttg
ttcttcctccccttgggatttgctctgaaggcattagttaatttcccagactaccagatt
tttgaagaggtggtgaaaggaagggaagatgacaccttttttgggaactgtgttactgag
atgctgagagcggtggtggatgccggctgtttgacacagcaaaacgtcctggattacctg
ggaaagagcttcagagtgaaactcaacctgcctgaatggtacagcaatgaacaggcagca
gatttcattctgagttgtatctgcattcacctgaccaatagaactgaaaagttctacctg
ctctgtatgatgacccagaagctctatgcttttgccaaaggggagtgcatggaggataat
ccagacagtctcatgtatcatgaggtgcttaccccaggacagcttttccttatgttctta
aaggagaggcttgaaacctggctgcaatctgttaggtttgttctggagaaaagagcagaa
aaggcagatatcagcctgaatacagacaccctggtgaaggcattcagcctggtaccagac
ttcaccaagccatttgagtatctgcttgcaactggtaatctgcggtctaaaacagggttg
ggcatgttgcaggccagtggtctctgtgtggtgggggacaagttgaatttcatccgctac
ctctcccacttccgttgcatacacagaggggcagcgttttcccagatgagaaccacaact
gtccgcaagctgctgcccgaatcctggggcttcctgtgccctgtggacaccccggacgga
gagccctgtgggctgatgaaccacatgacagctctgtgcgaaatcgtcacggagatggtg
cctgtgatggacattccacctttgttatgttccctgggtgtcactcccattgatgcagct
ccaagccagccttactcagagtgctacagagttgtgctggatggctccatggtgggctgg
gtagagcgggagctggctcctgagattgcacaaaccctccaccgtttcaagataacacaa
gagaagagatttcctgcacgggcagaagtggtccttatcccaatgacaggaaaacccagc
ctgtatcctgggctgtttattttcactaacccttgccggatggtgcggcctgtcagaaac
ctgtcctatggaaggaatgaatggattgggactctggaacagatcttcatgaacgtggcc
acgatggagtcagaggtggtgcctggagtgaccactcaccaggagctcttccctcacagc
attttgagtgtggtggccaatctcattcccttctccgaccacaaccaaagtccacggaac
atgtaccagtgccagatgggaaagcagacaatggggtttcctgtttacaactacaaggat
cgctcagataacaaactgtaccacctgcacaccccccagagccctctggtgaggcccagc
atgtatgactattttgggatggacagctatcctgttggcaccaactccatcgtggctgtc
atctcctacagtggctatgacatggaagatgcaatgattgtaaataaatcttcctggcag
agaggatttgcttatggaagtgttatcaaggtggagagcattgacctttcccttaaagcc
agcagggcaggcgacaatttagtatttggcatcaggcctggtgatccaaatgttggggag
aagctggatgctgatggactgccttttgttgggtccatcctgcagcctggggaccctttc
tacagcttcatgaacctcaacacaggagagaccttcactgtgtactatccgagtaaggaa
gtgggcattgtggacaatgttaggttgtgcagcaatgaccgtggcactgggaagttcaag
aaggcttgcatcactgtcagggttccccgaaatcccactattggagacaaatttgccagc
cgtcatggacagaaaggtatcctgagccagctctggcccatcgaggacatgcccttcaca
gagaacgggatggttccagacatcctgttcaaccctcatggctttccttctcgcatgacc
attggtatgttaattgagagcatggcagggaagtcagcagccctgcatggggtctcctat
gatgccactcccttcaccttcagcgagaagaagtctgctctgaaatacttcggtgagact
ttagtgagcgcgggttacaacttctttgggacagagaagatgtacagcggcatcagtggg
gtagagctggaggcagagatcttcgtggggctggtgtactaccagcgcctgcgccacatg
gtctccgacaagttccaggtgaggaccacggggccccgagatgctgtcaccaaccagcct
gtcaaggggaggaatgtggaaggtgggatccgctttggcgagatggagcgggatgctctg
ctggcccatggcacgtccttcctgctgcaggaccgcctgttcaactgctcagacggctct
gtagcctacgtgtgcacaagctgcggcagcattatatcccctgtgctggagaaactgtcc
cactcctctgtgaccagcagcaggaggtattcttgctctgtctgcagcaaggtgaatgcc
atcgaggttgtccctgtgcctcatgtcttccactactttgtggctgagctggcagccatg
aacataaaaacaaagctcaatgtggagtag
DBGET
integrated database retrieval system
