Sturnus vulgaris (common starling): 106862755
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Entry
106862755 CDS
T08833
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
svg04515
]
106862755 (PCDH18)
Cell adhesion molecules [BR:
svg04515
]
Cadherins
Protocadherins
106862755 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Syndecan
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
106862755
NCBI-ProteinID:
XP_014747442
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MYRIDGKMHFLFIFALIIISCNNAVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKMPN
PSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHTYSLSAND
FFSIDVRTRTDGAKYAELIVVRELDRELKSTYELQLTASDKGVPQRSGSSLLKISISDSN
DNSPVFEQQSYIIQLLENSPIGTLLIDLNATDPDEGANGKVVYSFSSHVSAKIIETFRID
PEKGHLTLLKQVDYEATKSYEIDAQAQDMGPNSIPAHCKIIIKVVDVNDNKPEINLNLMS
TEREEVACISEGSPLDTFVALVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYILTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEVVILENNSP
GAYITSVTATDPDLGDNGQVTYTILENSVLGSSITTYVTIDPSNGAIYALRTFDHEEVNQ
IAFVVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNSTAEISIPKDAEIGFLVT
RIRATDRDSGMNSELSCSIAADKENSIFVMDPQTCDISINVSVESVPAKQWEFLVIVQDK
GSPQLSTKALLKCTILEHVYSFSSTEATLVSQPSLDISMITIISLGSICAVLLVIMVIFA
TRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRASPSS
SPALERGQMGSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQG
QYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPIDRLLGEGF
SDLFLTDGRIPAAMRLCTDECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFQAPQQHL
QQQQQQHQSLEEDAQAADAGEKKKSFSTFGKDCQSEEEPGDTCTSSLLSEMSSVFQRLLP
PSLDAYAECSEMDRSNSLERRKGHLPAKNVNYPPGVAAWAASTHFQNPANTGPALGTHSG
AQPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQN
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaatcgacggtaaaatgcactttctgttcatttttgcactgatcataatatct
tgcaataatgctgtgctgggcaagaatttgaaatacaggatttatgaggagcagagggtt
ggatcagtaattgcaagactatcggaggatgttgctgatgttttactaaaaatgcctaac
ccttcctcggttcggtttagagccatgcagagggggaattctcccttgcttgtagtccgt
gaggataatggagaaatcagcataggagctaaaattgatcgggagcaactgtgccagaaa
aacttaaactgctccatagagtttgatgtgatcactctgcccactgaacatctgcagctt
ttccatgttgaagttgaagtgctggatattaatgacaactctccgcagttttccagagct
cttatccctatcgagatatcagagagtgcagctgtaggaactcggatccctctggacagt
gcttttgatccagatgtgggagacaactcccttcacacttactccctttctgcaaacgat
ttttttagcattgatgtgagaaccaggactgatggtgctaagtatgcagagctgattgtg
gtcagagagctggatcgcgagctgaagtccacttacgaactccaactcactgcctctgac
aaaggggtgcctcagagatctgggtcatccctcctgaaaatcagcatttccgattccaat
gacaacagccctgtgttcgaacagcagtcatacattatccagctcttggaaaactctcct
attgggactttgctcatagacctcaatgctactgatccagatgagggcgccaatgggaag
gtcgtgtactcctttagcagtcatgtgtctgccaaaattatagaaacttttaggatagac
ccagaaaaaggtcacctgaccctgctgaagcaagtggactatgaagcaaccaaatcctac
gaaattgacgctcaggctcaggatatggggccaaattctattccagctcactgcaaaatt
ataattaaagttgtggatgtgaatgacaacaaaccagaaatcaacttaaatctgatgtcc
acggagagagaagaggtagcttgcatttctgaggggtcacctctggacacctttgttgcc
ctggtcagagtgcaagataaggattctggtgtcaatggagagattgtctgtaagctccat
gggcatggccactttaaacttcaaaagacttatgaaaataactatttaatcttgactaat
gccactcttgatagggaaaagagatctgaatacatcttgactgtaatagcagaggacaag
ggaacgccaagtctctccacagtgaaacactttactgtccaaatcagtgatgaaaatgac
aacccaccccgcttccagacaaacagatatgaagttgttatcttggaaaacaactctccg
ggagcatacatcacttcagtcacagccacagacccagatctgggtgacaatgggcaggtg
acatacactattttggagaactctgttttgggaagctctataaccacctatgtgaccatc
gatccctccaacggggctatctatgccctgcgaacctttgaccacgaagaagtaaatcaa
attgccttcgtggtccaagctagggatggagggagccagcagctcgttagcaacaccacg
gtcgtgctcaccatcatagatgaaaatgacaacgctcctgtcatcgtggggccggcgcta
cgcaacagcacagcagaaatctccatccctaaagatgctgaaatcggctttcttgtcacc
aggataagggctacagacagagactccggtatgaactctgaactcagctgctccatagca
gctgacaaggaaaacagcatctttgtgatggatccccaaacttgtgacatctctatcaat
gtgagtgttgaatcggttccagcgaaacaatgggagtttttggtgatagtccaggataaa
ggcagccctcagctcagtactaaagctcttctgaaatgtaccattttggagcatgtttat
tcattttcaagcaccgaagcaactttggtgagccagccctccctggacatctccatgata
acgattatatccttaggatcaatatgtgctgtgttactggttatcatggttatctttgct
acgaggtgcaatcgagagaaaaaggacaccaggtcttacaactgccgtgtggccgaatcc
acctaccagcaccacccaaaacgtccctccaggcagatccacaaaggggacatcacgctg
gtgccaacagttaatggcactctacccatcagatctcaccacagagcttcaccgtcatca
tcccccgccctggagagggggcagatgggcagcaggcagagccaccacagccaccagtca
ctgaacagcctggtgaccatctcctccaaccacgtgcctgagaatttctccctggaactc
acccacgctacaccagctgtcgagcaggtttctcagcttctctcgatgcttcaccagggc
cagtatcaaccaaggccaagttttcgaggaaacaagtattccagaagctacagatatgcc
ctacaagatatggataaattcagcttgaaagacagtggccggggtgatagtgaagctgga
gacagtgattatgatttggggagagagtctccaattgacagacttcttggggaaggattc
agtgaccttttccttacagatgggagaattcctgcagccatgcgcctgtgcacggacgag
tgcagggtcctgggccactcggaccagtgctggatgccacctctgccctctccctcctcc
gactacagaagcaacatgttcatccctggggaggagttccaggcaccccagcagcacctg
cagcagcagcagcagcagcaccagagcctcgaggaggacgcccaggcagcggacgccggt
gagaagaagaagagcttttcaacatttgggaaggactgccagagcgaggaggagccaggg
gacacctgcacctcctcgctgctctccgaaatgagtagcgtcttccagcgcctgctgcct
ccctcgctggatgcctacgcggagtgcagtgagatggatcgctccaactcgctggagcgc
aggaagggacatctgccagccaagaatgtcaattatccgccgggggtggcagcctgggca
gccagcacgcacttccaaaacccggccaacaccgggcccgctctggggactcactcggga
gcgcagccttcgtccaaatggctgccagccatggaggagatcccggagaattacgaggaa
gatgattttgacaatgtgctcaaccacctcagcgatggcaaacatgaactcatggatgcc
agtgagctggtggcagaaattaacaagctgctgcaagatgtccggcagaactaa
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