Sturnus vulgaris (common starling): 106862855
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Entry
106862855 CDS
T08833
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106862855 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svg03041
]
106862855 (PRPF40A)
Spliceosome [BR:
svg03041
]
Complex A
U1 snRNP components
U1 related factors
106862855 (PRPF40A)
Complex B
106862855 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
106862855
NCBI-ProteinID:
XP_014747564
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MRPGGVDRGSLMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMP
GMMQSVMPGMMMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVSTVQPSSSTTS
SASEDHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSD
SGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPDDASAATSAPAAATDSGAPTAA
PGTESGAATAAPTGAAAAEGDPAPAAATTGDTESAGTATSEEQGQPSAATGTQESGDTAT
ATNEEGAKQEGTADAAAKKEDEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQ
AMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKM
TSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNI
LDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQ
KSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTA
LDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNI
KLAFNSESAFKSMLKQATPAIELDAVWEDVTFPPSLYLAQQHECQHHHSKTKKHSKKSKK
HHRKRSRSRSGSESEDDDSHSKKKRQRSESRSASERSSSAESERSYKKSKKHKKKSKKRR
HKSDSPESDVEREKDKKERERDSEKERARQRSESKHKSPTKKRPGKDSGNWDTSGSELSE
GELEKQRRTLLEQLDEDQ
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccggcggcgtcgaccgaggctctctgatgatgggacacccaggaatgccccac
tacccccccatgggcatgcaccccatggggcagagaccccccaacatgcccccagtgccc
cacgggatgatgcctcagatgatgccccccatgggaggaccccccatggggcagatgcct
ggcatgatgcagtcagtgatgcctgggatgatgatgtcccacatgtcccaggctgccatg
cagcccacggttcctcccggagtgaacagcatggatgcacaagtaggtgtgacccctcct
ggaactcagaccactcatcccgtggtgtccactgtccaacccagctccagcaccaccagc
tctgccagcgaggatcactccaagcagaaatccacgtggactgaacacaaatctccagat
ggaagaacttattattacaacactgagaccaagcaatccacgtgggagaaaccagatgac
ctcaaaactcctgctgagcaattgttatccaagtgtccctggaaggaatataaatcagat
tctgggaagccttattattataattcccaaaccaaggaatctcgttgggcaaaacccaaa
gagctggaggatcttgaagcaatgattaaagctgaagaaaacagcacgaagccggacgac
gccagcgcggccacctcggccccggccgcggccaccgacagcggggccccgaccgcggcc
ccgggcaccgagagcggcgcggccacggcggcacccacgggtgctgctgctgctgagggg
gaccctgctcctgctgctgccaccacgggggacacggagagcgctggcacggccaccagc
gaggagcagggacagcccagcgcggccaccgggacgcaggagagcggtgacaccgccacg
gccaccaacgaggagggggccaaacaggaggggacagcagatgctgctgcaaagaaggag
gatgaggatgcccaacctgtgaaaaaaacttacacatggaacacaaaggaagaggccaaa
caggcatttaaagaactgttaaaagaaaagcgggttccatccaatgcttcctgggagcag
gccatgaaaatgatcattaatgaccccagatacagtgctttggcaaaactgagtgaaaaa
aaacaagcttttaatgcttacaaagttcagacagagaaggaggagaaggaagaagccaga
tccaagtacaaggaagccaaggaatccttccaacgtttcctggaaaaccacgagaagatg
acatccaccaccagatacaagaaagctgagcagatgtttggggagatggaagtgtggaat
gccatctccgagcgcgaccgcctggagatttatgaggatgttttgtttttcctgtccaag
aaggaaaaggaacaagccaagcagctgaggaagaggaactgggaagccctgaagaacatt
ctggacaacatggccaatgtcacctactgcaccacctggtcagaggcccagcagtacctg
atggacaaccccacctttgctgaggatgaggagctccagaacatggataaggaggatgcc
ctgatctgttttgaggaacacatcagggccttggagaaagaggaggaggaggagaagcag
aaaagtttgctgagggaaaggaggaggcagaggaaaaacagggaatctttccagctgttt
ctggatgagctgcacgagcacgggcagttacactccatgtcctcctggatggaattgtac
ccagccatcagctctgacatcagattcaccagcatgctgggccagcctggatcaacagcg
ctcgacctgttcaagttttacgtggaggatttaaaagctcgttaccacgatgagaagaaa
atcattaaagacatcttaaaagataaaggatttgtggtggaagtgaacacttcctttgag
gattttgtcactgtcatcagctccaccaaaagagccaccacgttggatgctggcaatatc
aagttggctttcaacagtgaatcggccttcaagagcatgctgaaacaggccacccctgcc
atcgagctcgatgctgtgtgggaggatgtaacttttcccccctctctttaccttgcccaa
cagcacgagtgtcagcaccaccactccaagaccaagaaacattcgaagaaatccaagaag
catcaccgcaagcgctcgcgttcccgctccggctcagagtctgaggatgacgacagccac
tccaagaagaagcggcagcgctcggagtcgcgctcggcgtccgagagatcgtccagcgct
gagtccgagaggagttacaagaagtccaaaaaacacaagaagaagagcaagaagaggagg
cacaagtctgattcaccagaatccgatgtggaacgagagaaggacaagaaagaaagagag
agggacagtgagaaggaaagagccagacagagatccgagtccaagcataaatctcccact
aaaaaacgccctggaaaagattctggaaactgggacacctctggcagcgagctgagcgag
ggggagctggagaagcagaggaggactctgttggaacagctggatgaagatcaatga
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