Sturnus vulgaris (common starling): 106863379
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Entry
106863379 CDS
T08833
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
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]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106863379 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svg03019
]
106863379 (SMG5)
03032 DNA replication proteins [BR:
svg03032
]
106863379 (SMG5)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106863379 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
106863379 (SMG5)
DNA replication proteins [BR:
svg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
106863379 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
106863379
NCBI-ProteinID:
XP_014748310
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MSQGGGAAGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQDVFKPENISLRNKL
RELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGI
GFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLG
DLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCI
QSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVSFMYLQSLLQ
PKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMV
IICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTD
DQEPRELVNSIEKEAEAELANHQPSEEQQKNDCKKSKKYSRLSCLRRRRHPQKADESDLS
EGFDSDSSQSSIKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEE
GSSQGKSGPKEALKNCVDGSGLGDSKSPSISKTEAVDPAVNGPASLSTNDASIASNLQAM
STQLFQTKRCFRLAPTFSNILLKPNSEPAALKDGTESKPCVNGDLEKPSLAEQDDVSDSE
ESISSNKSCRNERSLQEKLEIMTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLS
VLLNLLPSAADLQESGLALCDEVKDILSDAELPDLKANLLLPEDVALRNLPPLKNAHKRF
NFEQDRPIFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQ
AQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQH
LALVKQLAASGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVG
KSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGNGEDDTTGMVTIITGFQLEDPSSFSVP
MQSAIQAAANASIEIKNVLEFYKQWKEMG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggtggcggggccgccggcgagagcggagagccggaggccaaggtgctgcac
accaagcggctgtaccgggcagtggttgaggctgtgcaccggctggatctcatccttggc
aataaggcagcttatcaggacgtgttcaaaccagagaacatcagcttgaggaacaagctg
cgggagctgtgtgtgaagctgatgttcctgcatcctgtggattatggaagaaaagcagaa
gaactgctctggagaaaggtttactatgaagttatccagctcattaaaacaaataaaaag
cacatccacagccgcagcaccctggagtgcgcgtaccggactcacctggtggctggcata
ggattttaccagcacctcctgctctacatccagtcccattatcagctggagttgcagtgc
tgcatcgactggacacacgtgacagatcctctcataggctgcaagaaacccgtgtctgcg
tcagagaaggagatggagtgggcacagatggcctgtcaccgatgtctggtttatctggga
gatctcgctcgctatcagaatgagctggcaggtgtggacacagagctgctggctgagcga
ttttactatcaagccctttctgttgcaccacaaattggaatgcccttcaaccagctgggg
acgttggcagggagcaaatactacaatgtggaagcgacctactgctacttacgctgcatc
cagtctgaagtgtccttcgaaggtgcctatgggaacctgaagcggctctatgacaaagca
gccaagatgtatcatcagctgaagaaatgtgaaaccaggaagttgtctccaagcaagaaa
cgaggaaaagacattaagaggttgctggtgagcttcatgtacctgcagagtcttttgcag
ccaaagagcagctctttggattctgagctgacatctctctgccagtccgtgctggaggat
ttcaacttgtgcttgttctacctgccctctcctcctaacctgagctcaactagtgaagat
gaagaagagtatgagagtggctactccttccttcctgatctcctgatctttcgcatggtg
atcatctgcctcatgagcgttcacagcctcaagagggcaggttccaagcagtacagtgca
gccattgccttcacgctggccctcttctctcacctgataaatcacgtcaatattcgcctc
caggctgagctagaagaaggggaaaatcctgtcccagcctttcagagtgatggcacagat
gaccaggagccacgggagcttgtgaactcaattgagaaggaagctgaagctgagttggcc
aatcatcagcctagtgaggaacagcagaagaatgactgcaagaaaagcaagaaatactct
cgtctctcctgtctgcgccgccgccgccacccccagaaggcggatgagagcgacctgagt
gagggctttgactctgactccagccagagctccatcaagggcagtgatggctcagagagt
ggttcagagaagagtgatgaggaagcagaagctgcttttgatgtggagacagactccgac
atgaacagccaagaatctcggtctgacttggaggacatggaggatgagccgggtgaggag
ggaagcagccaaggcaaaagtgggcccaaagaggccttaaaaaactgtgtggatggcagt
gggctgggggactccaagagcccaagcatctctaaaactgaggctgtggatccagcagtc
aatgggccagcttccctgagcactaatgatgcaagcatagccagtaatctccaggccatg
tccacccagctgttccagaccaaacgctgcttccgcttggctcccacgttcagcaacatc
ctcctgaaacccaacagtgaaccagctgccttgaaggatgggacagagagcaagccatgt
gtcaatggagatctggagaagcccagcttggcagagcaagatgatgtgtctgactccgaa
gaaagcatttcaagtaacaaatcctgcagaaatgagcgatctcttcaggagaagttggag
atcatgaccaatgaagggctgctgcttactgtcaaggtgttcctggactggctgaggaca
aacacagacctcatcattatgtgtgctcagagctctcagagcctgtggaacaggctgtct
gtgctcctgaaccttctgccttctgctgcagacctgcaggaatcagggctggccctgtgt
gatgaagtcaaagacatcctgagtgatgctgagctcccagacctgaaggccaacctgctg
ctccctgaagatgtggccctgcgcaatctcccccctctgaaaaatgcacacaagaggttt
aactttgagcaggaccggcccattttctcagcagttgaggagtctgtcgtgcggatctgc
tgcattcggagctttggccacttcattacccacttgcaaggcagcatcctgcagttcaac
tcagagcttgggatcttcatcagcatagcacagtcagagcaagacaacttgctgcaccag
gcccaggcccagtttcacatggctgcagaggaagctcgtcggaacaggctcatgagagac
atggctcagcttcgactgcagctggaagtgtctcagctggagggaagtctccagcagccc
aaggcacagtcagccatgtctccttaccttgtcccggacacccaagccctctgccagcac
ctggctcttgtcaagcagctggctgctagtgggaggttcataatcatcatccctcgaaca
gttatcgatggcctagacttcctgaaaaaggagaacgctggtgctagggacagcattcgg
tatctggaggcagaatttaaaaagggaaacaggtacattcgttgccagaaagatgttggg
aagagctttgagaggcataaattgaagagacaagatttagatgcctggaatctctataaa
atactggacagctgcaaacagttgacagtgtcccagggcaatggagaggatgacaccaca
ggaatggtcaccatcatcacgggcttccagctggaagacccgagctcattctcggtgccc
atgcagtctgccatccaggcagccgccaacgccagcatagagataaaaaatgttctggag
ttctacaagcagtggaaagagatgggctga
DBGET
integrated database retrieval system
