Sturnus vulgaris (common starling): 106863566 Help Entry 106863566         CDS       T08833                                  Symbol CAPN1 Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism svg  Sturnus vulgaris (common starling) Pathway svg04141   Protein processing in endoplasmic reticulum svg04210   Apoptosis svg04217   Necroptosis svg04218   Cellular senescence svg04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:svg00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     106863566 (CAPN1)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     106863566 (CAPN1)    04217 Necroptosis     106863566 (CAPN1)    04218 Cellular senescence     106863566 (CAPN1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     106863566 (CAPN1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:svg01002]     106863566 (CAPN1) Enzymes [BR:svg01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      106863566 (CAPN1) Peptidases and inhibitors [BR:svg01002]  Cysteine peptidases   Family C2: calpain family    106863566 (CAPN1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 EF-hand_5 CAPN13-like_C_EFh DUF6009 Y_Y_Y Motif Other DBs NCBI-GeneID:  106863566 NCBI-ProteinID:  XP_014748532 LinkDB All DBs Position Unknown AA seq 715 aa AA seqDB search MAEPPVVPVFCTGVSAQVRHQRAKELGLGQHDNAVRYLGQDFGQLAQECRRSGTLFRDPA FPPAASSLGFRELGPGSSKTRGVEWKRPTELCPRPQFIVDGATRTDICQGALGDCWLLAA IASLTLNETLLHRVVPHGQSFQQGYTGIFHFQIWQFGEWLDVVVDDYLPTKDGKLLFVHS AEGSEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEWFDLRRPPADLYQIILK ALERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTGAKQIPYRGQALELIRMRNPWGE VEWTGAWSDGSAEWHAVEPALRQQLMVKMEDGEFWMSFRDFLREFTRLEICNLTPDALQS RKFRKWNTQLYDGTWRRGSTAGGCRNYPATFWINPQFKIQLEEVDDERDEDGGREPGCSF LLALMQKHRRRERRYGKDMETIGFAVYEVPPEYVGRSGVHLKREFFLANASRARSEQFIN LREVSTRFRLPPGEYIVVPSTFEPNKEGDFVLRVFSEKKAGTEEMDDKIQATLPDEKVLS ESEIDENFKQLFKQLAGPDLEISVTELQTILNRIIAKHKDLRTKGFSIESCRSMVNLMDK DGNGKLGLVEFNVLWNRIRNYLSIFRKFDLDKSGSISAYELRLALEAAGYRLNKKLHELL ITRYAEPDLALDFDSFVCCLVRLETMFRFFQAMDVDQDGVVTFDLLQWLQLTMFA NT seq 2148 nt NT seq  +upstreamnt  +downstreamnt atggcagagccgccggtggtgccggtgttctgcaccggcgtctcggcgcaggttcggcac cagcgagccaaggagctggggctgggccagcacgacaacgccgtgcggtacctgggccag gatttcgggcagctggcccaggagtgccggcgctccgggaccctgttccgggaccccgcc ttccccccggccgcctcctccctgggcttccgtgagctgggccccggctcttccaaaacc cgcggcgtggagtggaaaagacccacggagctgtgtccacgcccacagttcattgtggat ggagccacgcgcaccgacatctgccagggagctctgggtgactgctggctgctggcggcc attgcgtcgctgacgctcaacgagacgctcctgcaccgcgtggtgccgcacgggcagagc ttccagcagggctacaccggcatcttccacttccagatctggcagtttggcgagtggctg gacgtggtggtggacgattacctgcccaccaaggatgggaagctgctcttcgtgcactcg gccgagggctccgagttctggagcgcgctgctggaaaaggcctacgccaaggtgaacggc tgctacgaggcactgtcagggggcagcacctccgagggcttcgaggatttcaccggcggc gtcaccgaatggttcgacctgcgccggcccccggccgacctgtaccagatcatcctgaag gcactggagcgtggctcgctgctgggctgctccatcgacataaccagcgcctttgacatg gaggctgtgaccttcaagaagctggtgaagggccacgcctactcggttaccggcgccaag cagatcccgtaccgagggcaggccctggagctcatccggatgcgcaatccctggggagag gtggagtggacaggcgcctggagcgatggctcggccgagtggcacgcggtggagccggca ctgcgccagcagctcatggtcaagatggaggatggagaattctggatgtccttccgggat ttcctgcgggaattcacccgcctggagatctgcaacctcaccccggatgcgctgcagtcc cgcaagttccgcaagtggaacacacagctctacgatggcacgtggcggcgcggcagcacc gccggcggctgccggaactaccccgccacgttctggatcaacccccagttcaagatccag ctggaggaggtggacgatgagcgggatgaggacggcgggcgtgagcccggctgcagcttc ctgctggcgctgatgcagaagcaccggcgccgcgagcgccgctacggcaaggacatggag accatcgggttcgctgtctatgaggtccctcccgagtacgtggggaggtcaggagtgcac ctgaagcgcgagttcttcctggccaacgcgtcgcgcgcgcgctccgagcagttcatcaac ctgcgcgaggtgagcacgcgcttccgcctgccgcccggcgagtacatcgtggtgccctcc accttcgagcccaacaaggagggcgacttcgtgctccgcgtcttctcggagaagaaagcc ggcaccgaggagatggatgacaagatccaggccacgctgccggacgagaaagtgctgtcg gagagcgaaatcgatgagaacttcaagcagctcttcaagcagctggcggggccggacctg gagatcagcgtcactgagctccagaccatcctcaaccgcatcattgccaaacacaaagat ctgcgcaccaagggcttcagcatcgagtcctgccggagcatggtgaacctgatggacaaa gacgggaacgggaagctgggactggtggagttcaacgtcctctggaaccggatccgcaat tacctgagcattttccgcaagttcgacctggacaagtcgggctccatcagcgcctacgag ctgcgcctggcgctggaggctgcagggtaccggctgaacaagaagctgcacgagctgctc atcacccgctacgccgagcccgacctggccctggactttgacagcttcgtctgctgcctc gtgcgcctcgagaccatgttccggtttttccaagccatggacgtggaccaggacggcgtc gtcaccttcgacctgctgcagtggctccagctcaccatgtttgcctga

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