Sturnus vulgaris (common starling): 106863607 Help Entry 106863607         CDS       T08833                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism svg  Sturnus vulgaris (common starling) Pathway svg04510   Focal adhesion svg04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:svg00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106863607 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     106863607 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:svg00536]     106863607 (COL2A1) Glycosaminoglycan binding proteins [BR:svg00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106863607 (COL2A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  106863607 NCBI-ProteinID:  XP_014748587 LinkDB All DBs Position Unknown AA seq 1637 aa AA seqDB search MGWAASPPASPKLRIPQTPHPPNPTSPKPHIPLSPVPPPALAPVVAGGVPREGSGGPARL GGRGRVRGHRGRVRGHRGKVQGARRGRPGSGYSSGGRRGRDLNGASGPNGHCRPRARIGR SRLAMPGHRPAPGGHRSVRSGHRTEPAATGAVLGAAPRPGLLLLLLLCLAAAAAAQDRDL PEAGSCLQDGHRYSDKDVWKPEPCRICVCDTGTVLCDEIICEELRDCPSPEIPFGECCPI CPTEQPSGQPGPKGQKGEPGDIKDVVGPRGPPGPQGPAGEQGQRGDRGEKGEKGAPGPRG RDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRG PPGPSGSPGPQGFQGNPGEPGEPGAAGPMGPRGPPGPPGKPGDDGETGKPGKSGERGPPG PQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGAKGESGSPGENGSPGPMGPRGLPG ERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQG PRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLG PKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERG APGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGDPGRPGEPGLPGARGLTGRPGDAG PQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRG LPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQGVPGEAG APGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQGPPGLQG MPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGESGPPG PSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGAPGPQGPSG APGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKG ARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRG ERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDG AAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPAGARGMPG PQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVG PSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQPE KGPDPGRYMRADEAAPGLRPHDAEVDATLKALNNQIESIRSPEGSRKNPARTCRDIKLCH PDWKSGDYWIDPNQGCTLDAIKVFCNMATGETCVYPSPGSIPRKNWWSSKAKEKKHVWFA ETINGGFHFSYGAEDLAPNTANIQMTFLRLLSTEGSQNVTYHCRNSVAYLDEESGSLRKA LLIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGRTVIEYRSQKTSRLPIVDIAPMDI GGPEQEFGVDLGPVCFL NT seq 4914 nt NT seq  +upstreamnt  +downstreamnt atgggatgggccgcctcacccccggcatcccccaaactccgcatcccccaaactccacat cccccaaaccccacatcccccaaaccccacatccccctcagtccggtccctccgcccgct ctggccccggtggtggccgggggagtgcccagggagggctcgggagggccagcccggctc gggggccgggggagggtccggggccaccgggggagggtccggggccaccgggggaaggtc cagggggcccggcggggccggcccggctcgggttacagctccggggggcggcggggccgg gacttaaacggggcctcggggccgaacgggcactgccggccccgggcgcggatcgggcgc agtcgcctcgccatgcccggacaccgcccggcccccggcggccaccgctcggtccgcagc ggccaccgcacggagcccgcagccaccggcgcggtcctcggagccgctcctcggccgggg ctgctgctcctcctcctcctgtgcctcgccgccgccgccgccgcgcaggaccgagacctc cccgaggctggcagctgcctgcaggacgggcaccgctatagcgacaaggacgtgtggaag ccggagccgtgccggatctgcgtgtgcgacacggggacagtgctgtgcgacgaaatcatc tgcgaggagctgcgggactgccccagccccgagatccccttcggagagtgctgccccatt tgccccaccgagcagcccagcggacaacccggccccaagggacaaaaaggtgaacccggt gacatcaaagatgtcgtaggaccccgaggaccccccggcccgcagggccccgcaggtgag cagggacagcgaggggaccgcggcgaaaagggtgagaagggcgcccccggcccgcggggc agggatggggaacccggaaccccaggaaatcctggcccccccggaccccccggccccccg ggaccccccggcttgggggggaacttcgcggctcagatggccgggggcttcgacgagaag gctggaggggctcagatgggcgtcatgcagggacccatgggccccatgggaccccgcggc ccccccggcccctctggctcccccggtcctcaaggattccagggcaaccccggtgagccc ggcgagccaggcgctgctggtccgatgggtccccggggacctccgggacctcctggcaaa cccggtgacgacggtgagactggcaaacccgggaaatctggcgagcgcggcccccccggc ccccagggcgctcgtggcttccccgggacccccggcctgcctggagtcaaaggccaccgg ggctatcccggcctggacggcgctaagggagaagcgggagcacctggagccaagggcgag tccggctccccgggcgagaacggctcccccgggcccatgggtccccgcgggctgcccgga gagcgaggacgcccaggcccctcgggtgctgcgggcgctcgtggcaatgacggcctcccg ggcccggccggaccccccggtcccgtcggccccgcaggagcccctggcttccccggcgcc cccggctccaagggtgaagcgggtcccaccggagcgcgaggacccgaaggtgcccagggg ccccgcggagaatccgggacccccggctcgcccggccccgccggcgcccccgggaacccc gggaccgacggcatccccggagcgaagggatcagcgggtgctccaggcatcgcgggcgct ccaggattccctggcccccgcggcccacccggaccccagggagccaccggcccgctgggc cccaagggacagacgggtgaacctggcattgcgggattcaaaggcgagcagggacccaag ggagagacgggccctgcaggaccccaaggtgcccccggaccggccggggaggaagggaag agaggagcccgtggagaacccggagctgccggacctttgggaccacctggagagaggggc gctcctggcaaccgcggcttccccgggcaggatgggctggccggccccaagggggccccg ggtgagcgcggccctgctggcctggccggccccaaaggagccactggcgaccccggacgc cctggagagcccggcctgcctggagccaggggtctcacgggccgccccggggacgctggg ccccaaggcaaagtcggccccacgggtgcccctggcgaggatggacgccctggaccccct ggcccccagggggctcggggccagcctggcgttatggggttccctggtcccaaaggtgcc aatggtgagcctggaaaagctggtgaaaaaggacttcctggagcaccagggctgagggga cttcctggcaaggacggagagaccggagccgctggacccccaggacctgccggcccggca ggagagaggggagagcaaggagcccccggcccctccggcttccagggcctaccagggcca ccaggtccccccggtgagagcggcaaacctggagatcagggtgttcctggagaagctgga gcccccgggcttgtgggtcccaggggcgagcgcggcttccccggcgagcgcggctctcct ggcgcccagggcctgcaggggccccgcggcctccccggcacccccggcaccgacggaccc aagggcgccactggccccgccggccccaatggtgcccaaggacccccagggctgcaggga atgcccggggagagaggagctgctggcatcgctggtcccaagggagacaggggagacgtc ggagagaagggacccgagggagcccccggaaaggacggagctcgcggtctgacgggtccc attggcccccccggccccgctggccccaatggtgagaagggcgagtctggcccccccggc ccgtctggagccgccggtgcccgcggtgcccctggagagcgcggagagcctggagccccc ggccctgctggattcgccggacctccgggtgccgatggccagcccggagccaagggcgaa cagggagagcctggccagaagggcgacgccggagcccccgggcctcagggtccctctggg gctcctggaccgcagggtcccactggtgtcaccggtcccaaaggagcccggggtgctcag ggacccccgggagccaccggattccccggagcagccggacgtgtcggaccccctggcccc aacggtaaccccgggccccccgggccccccggctccgcgggcaaggacggccccaaaggc gcccggggcgacgcgggacctccgggccgagcgggagacccggggctgcagggccccgct ggaccccccggcgagaagggcgagcctggcgaggacggacccgcgggtccggacggtccc cccggtccccaagggctggcagggcagcgcggcatcgtggggctgccgggacagcgcggc gagcgaggattcccggggctgcccggaccctcgggagagcctggaaaacagggagcacct ggatctgctggtgaccggggaccccccgggcccgtgggacccccggggctgacgggacca gccggagagcccggcagggagggaaatcccggctctgacggacccccaggcagggatggg gcggccggagtgaagggcgatcgtggcgagaccggccccgtgggtgctcccggtgctccc ggcgctcccggcgctcctggccccgtgggacccactggaaaacagggagacagaggagag acgggtgctcagggtcccatgggtccctccggccctgctggcgctcgggggatgccgggt ccccaggggccgcgcggtgacaaaggcgaggcgggcgaggccggcgagcgcggcctgaag gggcaccggggcttcaccgggctccagggactgcccgggcccccgggtccatctggagac cagggtgctgccgggcctgcaggcccctctgggcccaggggtccccccggccccgtgggc ccctcgggcaaggacggctccaatgggatgcccggacccatcggcccccctggaccccgt gggaggagcggcgagcccggcccggcgggcccccccgggaaccccggcccgcccggcccc cccgggccccccggcaccggtatcgacatgtcggcgttcgcggggctggggcagcccgag aagggccccgaccccgggcgctacatgcgggcagacgaggcggcgccggggctgcggccg cacgatgccgaggtggacgccacgctcaaggccctcaacaaccagatcgagagcatccgc agccccgagggctctcgcaagaacccggccaggacctgccgagacatcaaactctgccac cccgactggaagagcggtgattactggatcgaccccaaccaaggctgcaccctggatgcc atcaaggtcttctgcaacatggccacgggggagacatgcgtgtaccccagccccggcagc atccccaggaagaactggtggagtagcaaagccaaggagaagaagcacgtctggttcgcc gagaccatcaacggcggcttccacttcagctacggtgctgaggacctggcacccaacacg gccaacatccagatgactttcctgaggctgctgtccaccgagggctcccagaacgtcacc taccactgccgcaacagcgtggcctacctggacgaggagtcgggcagcctgaggaaggcg ctgctcatccagggctccaacgatgtcgagatccgcgccgagggcaacagcaggttcacc tacagcgtgctggaggacggctgcacgaaacacacggggaagtggggcaggactgtcatc gagtaccgctcgcagaagacctcgcgcctgcccatcgtggacattgcacctatggacatt gggggccccgagcaggagttcggggtggacctcggccccgtctgcttcttgtaa

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