Sturnus vulgaris (common starling): 106864094
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Entry
106864094 CDS
T08833
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
svg01001
]
106864094 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svg04121
]
106864094 (TRIM28)
Enzymes [BR:
svg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106864094 (TRIM28)
Protein kinases [BR:
svg01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
106864094 (TRIM28)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106864094 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4
PHD
Motif
Other DBs
NCBI-GeneID:
106864094
NCBI-ProteinID:
XP_014749182
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MAVGNGLGAKGAEPPEPLELLELCGACRERLSPQREPRLLPCLHSVCRDCLGATPGAAGS
DGHVFECPVCHQQCPLGDIMENFFLQDGGAGTALGQGSGQRVPCPQTCTNCEDNAAATSF
CLECAEPLCDTCVEAHQRVRYTRDHSVQALGESLSPPVTSLSPGPCPGPGRVPGPCPAHP
AEPLSLFCSTCDSLTCRACHLGSHRHHPSLRAGAEAQRVTEGRQERLERQHRALSRAQRQ
QEHVLRFAARALDSPHGTALLLSRRLIHSQLLRALRVTVEPLEPQGDLKFQWDLQAWTKS
AESFGTIISEHPLPPSLSPPPLLSHPTAGAQDPSPASQVLRKPRSSPKEEKFVKKLLIKR
RGPPGAQDSPRLPKVPRVSLERLELDLELDPAQPPVFRIFPGPSAEEFSVIVIEQGTAGT
AGTAEEQQESPIGDTGDTKPVGLLPPAPGEPGPALGSSPGPGVPLAPGGLPGVPPGVPGV
SCCRVCGQAGAVVMCDRCQRCFHLHCHLPALQDVPRCQELPPPSLDGDQGPPLKLSPQDQ
QRCEFVLLELLCHEPCRPLQRLSSSPDGRDAIDLTLMRARLQEKLSPHYRSPQEFARDGW
QLLRQFHRLTEDKADVQSILELQRFLESRLSAVFGDQKFSRLLLDPEDALEMFPGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgggaacggcctcggggcgaagggagcggagccgccggagccgctggagctg
ctggagctgtgcggagcctgccgggagcgcctgagcccccagcgggagccgcgcttgctg
ccctgcctgcactccgtgtgccgggactgcctcggggccacgccgggagccgccggcagc
gacgggcacgtgttcgagtgccccgtgtgccaccagcagtgtcccctcggtgacatcatg
gagaacttcttcctgcaggacggtggggctggcacagccctgggccagggcagcgggcag
cgtgtcccttgtccccagacctgcaccaactgtgaggacaacgcagcagccaccagcttc
tgcctggagtgcgcggagccgctgtgtgacacctgcgtggaggcccaccagagggtcagg
tacacccgggaccacagcgtgcaggccttgggtgagtccctgtcgccccctgtcacctcc
ttgtctccggggccgtgtccggggccgggccgtgtcccggggccgtgcccggctcacccc
gcggagccgctctcgctcttctgcagcacctgtgacagcctcacctgccgggcctgtcac
ctgggcagccaccggcaccacccctcgttacgggcgggtgctgaagcacagagggtgacc
gagggccgtcaggagcgcctggagcggcagcaccgcgcgctgagccgggcgcagcggcag
caggagcacgtcctgcgcttcgcagcccgggccctcgacagcccccacggcaccgccctg
ctgctctccaggaggctgatccactcccagctgctccgggctctccgtgtcaccgtggag
cccctggagccccagggggacctgaaattccagtgggacctgcaggcctggaccaagagt
gccgagagcttcggcaccatcatttcggagcatcccctccccccctcgctgagccccccg
cccttgctgagccaccccacggccggcgcccaggacccctcccccgccagccaggtactg
aggaaacccaggagttcccccaaggaggagaagttcgttaagaagctgctcattaagagg
aggggtccccccggggcccaggacagtccccggctgcccaaggtgcctcgggtgagcctg
gagcgcctggagctggacctggagctggacccggcccagccgcccgtgttccgaatcttc
ccggggccctcggccgaggagttcagcgtcatcgtcatcgagcaggggacagcggggaca
gcggggacagcggaggagcagcaggagtctcccattggggacaccggggacaccaagccc
gtggggctgctgccgcctgccccgggggagccgggccctgccctgggctcctcccccggc
ccgggggtcccgctggccccgggggggctcccgggggtcccgccgggggtcccgggggtc
tcgtgctgccgcgtgtgcggccaggccggggccgtggtgatgtgtgaccgctgccagcgc
tgcttccacctgcactgccacctgcccgccctgcaggacgtgcccaggtgccaggagctg
ccccctcccagcctggacggggatcagggcccccccctcaaactgagcccccaggaccag
cagaggtgcgagttcgtgctgctggagctgctgtgccacgagccctgccggcccctgcag
cgcctctccagctccccggacggccgcgacgccatcgacctgacgctgatgcgggcgcgg
ctgcaggagaagctgagcccccactaccgcagcccgcaggagtttgcccgcgatggttgg
cagctgctgcgccagttccaccgcctcaccgaggacaaggcggatgtgcaatccatcctg
gagctgcagcgattcctcgagagccgcctcagcgccgtcttcggggaccagaagttctcc
aggctcctgctggatcccgaggatgccctggagatgttcccagggtcctga
DBGET
integrated database retrieval system
