Sturnus vulgaris (common starling): 106864372
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Entry
106864372 CDS
T08833
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
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09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
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106864372
03036 Chromosome and associated proteins [BR:
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]
106864372
Messenger RNA biogenesis [BR:
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]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106864372
Chromosome and associated proteins [BR:
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]
Eukaryotic type
Gene silencing
piRNA pathway
106864372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
M_domain
Ago_hook
UBA_7
UBA
Sigma54_CBD
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
106864372
NCBI-ProteinID:
XP_014749479
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MFNCAVAVAVFRNNRMLSSFPAIACRGRNPDLSHSGLGDHYENSHWGQQPAFRSEGNCSW
DKVIIDRTDKEAWPSITGAETESASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKT
NGNNGANGALVQSTSNQSALGAGGANGNGSSARVWGVAAGSSSGLAHCSASGGDGKMDNM
MGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNM
GNQNGNPTGTLGAWGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPI
NAMQTNGLPNWGMAVGMGAIIPPHLQGLPGANGTAVSQVSGGSGEGMGSSVWGMSPGNPA
TGNSNSGFSQGNGDTVNSALSAKQNGSSSAVQKEGNGANAWDSGPPSGPGVLAWGRGGGG
VGSVHSGAWGHPNRSASNGVNGEWGKPPNQHSNSDINGKGSTGWESSSVTSPNPAMQQGN
EQMNSWAKAAASGTTASEGSNDSGGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDL
DPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMN
STNTSSVSGWVNSPPAAVPTNTGWGDNNNKAPNGPGGWGESASSTTVNNAAAAKSGHAWS
GTANQEDKSPTWGEPQKPKSQNWGDGQKSNPSWTSGGGDWTDSSSVPGHLGDGKKNGSGW
DSDNRSGSGWNDSTKSGTSGWGNGTNSKANTGTSWGESLKPGPQQNWANKPQDNNVSNWG
GAASVKQTGSGWVGGPVPAKQKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNK
TVNMWDRNNPIIQSSTTTNTTTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPAGWGEMPA
VHTKSEASWGEPSSPSAAVDNGTSAWGKPPSSGTGWGENPAEPAGTYGRTNAPAAAPALC
KPASKSMQEGWGSGGDEVNLSTSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKPK
TNPRLSLGTFWRTERKRLLKDFVIEKLHRDLLKGMKTSSKQDEAWIMNRLIKQLTDMGFP
REPAEEALKSNSMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPISKESSM
DRPTFLDKLTLSFSNQDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQN
LNSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQL
LQFAAKNIGLSPAQLTSPINNPQHMTMLNQLYQLQLVS
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactgtgctgtagcagtggctgtgttcaggaataacaggatgctttcttccttt
ccagctattgcatgtagaggaaggaatccagatctcagccacagtggattgggagaccat
tatgagaattcccactggggacagcagcccgctttcaggagtgaaggcaactgcagctgg
gataaagtgataatagacaggactgacaaggaagcgtggccttccattaccggagctgag
actgagtctgcctcagaatgtactacagacactgactctgcctccaactgtggctcagag
aacagtagcatggctacagggagtgcccaaggcaacttcactggacatacaaagaaaact
aatggcaataatggcgccaacggagcactcgtccaaagcacttctaaccagagtgccctt
ggagctggtggagcaaacggcaacggcagctcggccagggtgtggggggtggctgcaggc
tccagctctggcctagctcactgctctgccagtggtggggatggaaagatggacaacatg
atgggagacggtagaagtcagaactgctggggtgcttccaactcgaatgctggcattaat
cttaaccttaaccctaatgccaatccagctgcctggcctgtacttggacatgaaggaact
gtgggagcaggcaacccttccagtatttgcagtccagtcagtgccataggtcagaacatg
ggcaaccagaatgggaacccaacaggcaccttaggtgcttggggaaacttgctgccgcaa
gagagcacagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcag
aaccttaacactgatggaccaaataacactaaccccatgaactcttcaccaaaccctatc
aatgcaatgcagacaaacggactgccgaactgggggatggccgtgggcatgggggccatc
atcccgccccacctgcaaggccttcctggtgctaacggaacagcggtttctcaagtcagc
gggggcagtggtgaaggaatgggcagttcagtatgggggatgtccccaggtaatcctgcc
acaggaaacagcaattctgggttcagtcaggggaatggagacactgtgaactcagcatta
agtgctaaacaaaacggatccagcagtgctgtgcagaaggaagggaacggagcgaacgcg
tgggactcggggcctccctctggccccggggtcctggcgtggggcaggggcggtggcggg
gttggcagtgtgcattctggagcctggggccaccccaaccgcagcgccagcaacggtgtc
aacggggagtggggcaagcccccgaaccagcattccaatagcgacatcaatgggaaagga
tcaacagggtgggagagctcgagtgttaccagtccgaatcctgccatgcagcagggcaat
gaacaaatgaactcttgggccaaagctgcagcatctggcaccacggctagtgaaggaagc
aatgacagcggtgggagtcaaaatgaaggcagtactgggagggagggggctggagagggc
aggaggagagacaaagggatgatagaccaagggcaagttcagttgccaagaaatgacctt
gaccccagggtcctgtccaatacggggtggggacagacccctgtgaagcaaaacactgcc
tgggaatttgaagagtccccaaggtctgaacggaagaatgacaatggaactgaggcctgg
ggttgtgcagctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaac
agtacaaatacctcttcagtatctgggtgggtcaactctccaccggcagctgttccaaca
aatacaggttggggagacaataacaacaaagcaccaaatggcccaggggggtggggagag
tcagcaagctctactactgttaataatgctgctgctgccaaaagcggccacgcttggagt
gggaccgcaaatcaggaggacaaatcacctacctggggtgaacctcagaaacccaaatct
caaaactggggagatggacagaaatcaaatccaagctggacttcaggaggtggagactgg
acagattcatcatctgttcctggacacttgggtgatgggaagaagaatggatctgggtgg
gattctgataatagatcggggtctggctggaatgattccacaaagtctgggaccagtggg
tgggggaatggcacaaacagcaaggctaatacaggtacaagttggggggaatctttaaag
ccaggcccccaacaaaattgggctaataaaccccaggacaacaatgtgagtaactgggga
ggagctgcttctgtaaaacagacggggtcagggtgggttggtgggccagtgccagccaaa
caaaaagagaactgtgaggcaactggctgggaagagccatctccaccgtccattcgccgc
aagatggaaatcgatgatggtacctcagcttggggcgacccaaattacaacaacaacaag
actgtaaacatgtgggatagaaataatcctataattcagagcagtaccacaaccaacacc
accaccactagcaccattatcaacaccaacatggttgaacctcagccatcgcaccagtca
agtgcccagccaaaccggtccccgctgcttggcccagcaggctggggagagatgcctgct
gtccacaccaagagtgaagcttcctggggagagccctcctccccttctgctgcagttgat
aatggcacttcagcgtgggggaagccccccagcagtgggaccgggtggggagagaatcct
gccgagccagcagggacctatggaagaacaaacgctccagctgctgccccagcactgtgc
aaaccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgaagtgaatctc
agtactagtcagtgggaagatgaagaaggagatatgtggaataatactgcttcacaagag
agcagctcctcctgtaattcctgggggaatgccccgaagaaaggacttcaaaagcccaaa
acaaatccgcgcttgtcccttggtactttctggagaactgaaaggaagagacttcttaag
gattttgtgatagaaaagctgcacagagatcttttaaagggcatgaagacatctagcaag
caggatgaggcctggatcatgaaccgtctgataaaacagctcacagacatgggcttccct
agagagccagcggaagaggccttgaagagcaacagtatgaatctcgatcaggccatgagt
gctctgctggaaaagaaggtggaaatggacaagcgtggaatgggagtgaccgactataat
ggaatggtcaccaaaccccttggctgccgcccaccaccaatctccaaagagtcttccatg
gaccgccccaccttccttgacaagctcaccctttctttctccaatcaggatggcggccta
gtggaagagcccactacttcaccatttttgccttcaccaagcctgaagctccccctttca
aacagtgcactccctaatcagaccctgggcgggattgcctcagggctgggcatgcaaaac
ttgaattcttctagacagataccgagtggcaatctgggtatgtttggcaatagcggagca
gcacaagccaggaccatgcaacagccgcagcaaccgccagtgcaacctcttaattcatcc
cagcctagtcttcgtgctcaagtgcctcagtttctatcccctcaggttcaagcacagctt
ttgcagtttgcagcaaaaaacattggtctcagccctgcacagttaacctcgccaattaat
aatcctcagcatatgacgatgttgaaccagctctatcagctgcagctggtgagttaa
DBGET
integrated database retrieval system
