Sturnus vulgaris (common starling): 106864771
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Entry
106864771 CDS
T08833
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svg03009
]
106864771 (DDX54)
Enzymes [BR:
svg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106864771 (DDX54)
Ribosome biogenesis [BR:
svg03009
]
Eukaryotic type
Pre-60S particles
Helicases
106864771 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
106864771
NCBI-ProteinID:
XP_014749920
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MAAAPGRARRGPGPFRPRPDTWIRRRYRHGAAHPPPAPRSAGTGDGTGRDGTGREGSEAG
PNELCPCPPCRWARYCGPGLHVPMSTVPVAVTPLPAFPTTTEEDDGADAELDTQAMVRAQ
NQKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPAILRGRDVVAMARTGSGKTA
CFLIPMFERLKAPSQAGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDKMEDQ
FAALHENPDIIIATPGRLVHVAVEMKLKLHTVEYVVFDEADRLFEMGFAEQLQEIIARLP
DCHQTVLFSATLPKLLVEFARAGLTEPMLIRLDVESKLSEQLKLVFFHVRGDDKPAVLLH
LLRSVVKPQDQTVVFVATKHHTEYLRELLTAQGIRCTHIYSSLDQTARKINIAKFSQGKC
PVLLVTDVAARGLDIPMLDNVINFSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEMPY
VFDLHLFLGRPLILAGAQEMPTDAGGVLGRVPQSLVDDEECLLLTDHEGSLELRSLRRVA
DNAHKQYLRSRPGPSPESIKRAKDLDVSQLGMHPLFRARFEDTELQRLKLVDSIKTYKSK
ATIFEINATSRTPASTVMRSKRRHDHALIEKFQRGQQEKQAAALKGQGLCPPAPEPQDGE
GEQEDLQDVFSNVRGQKRKRGRGGEDGPRKKPQQAAQQDEDFYIPYRPKDFESERGLSVG
GEGSAFEQQAAGAVLDLMGDENHNLNKSKQLLKWDRKKKRFVGQTGQEDKKKVRTESGHY
ISSSYKNNLYEKWKQKYKVDERDEDEEGPRSREQFRGKHRRGHGPTQPPAQGRVRSELKT
KQQILKQRKRAAKQRFLQSGGLKRLKARNRQRVQELRQMAFGRRAGTARKGKLRKRM
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggccccggggcgggcacggagagggcccggccccttccggccccgccccgac
acgtggatccgccgccggtaccgacatggcgccgcgcacccgccgccagccccgcggagc
gccggtacgggggacgggacgggacgggacgggacaggacgggaggggagcgaggcgggc
ccgaacgagctgtgtccctgccccccgtgccgctgggcccggtactgcggccccggtctc
catgtgcccatgtccacagtaccggtcgctgtgaccccactgcccgccttccctaccaca
accgaggaggacgatggcgccgatgctgagctggacactcaggccatggtgcgggcccag
aatcagaagaagaagaaatctggaggattccagtccatgggcctcagctaccctgtcttc
aagggcatcatgaagaagggctacaaggtgcccacacccatccagaggaagaccatccct
gccatcctacgtggccgggacgtggtggcgatggcacggacgggcagtgggaagacagcc
tgtttcctcatccccatgtttgagcggctgaaggcgcccagccaggccggggcccgcgcc
ctcatcctctcgcccacccgggagctggccctgcagaccctcaagttcaccaaggagctg
ggcaaattcacgggcttgaagacagccctgatcctgggaggagacaagatggaggaccag
tttgctgccctgcatgagaaccccgacattatcatagccacccctgggcgcctggtgcac
gtggcagtggagatgaagctgaagctgcacaccgtggagtacgtggtgttcgacgaggcc
gacaggctctttgagatgggctttgctgagcagctccaggagatcattgcccgcctccca
gactgccaccagaccgtgctgttctctgccacgctgcccaagctgctcgtcgagtttgcc
cgggctggcctcactgagccgatgctgatccgcctggatgtggagtccaagctgagtgag
cagctcaagctggtgttcttccatgtgcgtggggatgacaaaccggccgtgctgctccac
ctgctccgcagcgtggtgaagccccaggaccagacagttgtcttcgtggccaccaagcac
catacagagtatttgagggagctgctgacggcgcagggcatccgctgcacccacatctac
agctctctggaccagactgcccgcaagatcaacattgctaagttctcccagggcaagtgc
ccagtgctgctggtcaccgacgtggctgcccgggggctggacatccccatgctggacaat
gtcatcaatttcagcttccctgccaagggcaagctgttcctgcatcgtgtcggccgtgtg
gcccgagctggccggagtggcactgcctactcgctggtggctcctgatgagatgccctac
gtgttcgacctccatctcttcctggggcgcccactcatcctcgctggagcccaggagatg
cctactgatgctggcggggtcctgggccgtgtcccccagagcctggtggatgacgaggaa
tgcctgctgctgacggaccacgagggctctctggagctgcgcagcctccgccgcgtcgca
gacaacgcccacaagcagtacctgcgctcccggcccgggccctcgccagagtccatcaag
agggccaaggacctggatgtgtcccagctgggcatgcaccccctcttccgagctcgcttc
gaagacaccgagctgcagaggctgaaattggtggatagcattaaaacctacaagtccaag
gcgaccatctttgagatcaacgccacatcccgcacaccggccagcaccgtgatgcgatcc
aagcggcgccacgaccatgccctgattgagaagttccagcgtgggcagcaggagaagcag
gcagcagcacttaaagggcaggggctgtgcccgcctgctcctgagccccaggatggggaa
ggagagcaggaagacctccaggacgtgttctccaatgtgagaggccagaagcgaaaacgg
ggccgaggaggagaagatggtcccaggaaaaagccgcagcaggcggcacaacaggacgag
gacttctacatcccataccggcccaaggactttgagagtgagcgggggctgagtgtggga
ggcgagggcagcgccttcgagcagcaggcagctggagccgtgctggatctcatgggcgat
gagaaccacaacctcaacaagagcaagcagctgctcaagtgggaccgcaaaaagaagcgg
tttgtggggcagacaggccaagaggacaagaagaaggtgcggacggagagcgggcactac
atcagcagctcctacaagaacaacctctatgagaagtggaagcagaagtacaaagttgac
gagcgggatgaggatgaggaagggccacgcagcagggagcagttcagagggaagcacagg
cgtgggcacgggcccacgcagccgccggcgcagggcagggtgcgctcggagctgaaaacc
aagcagcagatcctgaagcagcgcaagagggcggccaagcagcgcttcctgcagagcggg
ggcttgaagcgcctcaaggcccggaaccggcagcgggtgcaggagctgcggcaaatggcc
ttcgggcgccgggcaggcactgccaggaagggcaagctgaggaagaggatgtag
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