Sturnus vulgaris (common starling): 106864858
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Entry
106864858 CDS
T08833
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03440
Homologous recombination
svg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106864858 (TOP3B)
03460 Fanconi anemia pathway
106864858 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svg03032
]
106864858 (TOP3B)
03400 DNA repair and recombination proteins [BR:
svg03400
]
106864858 (TOP3B)
Enzymes [BR:
svg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106864858 (TOP3B)
DNA replication proteins [BR:
svg03032
]
Eukaryotic type
DNA Topoisomerases
106864858 (TOP3B)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
106864858 (TOP3B)
FA (Fanconi anemia) pathway
106864858 (TOP3B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
106864858
NCBI-ProteinID:
XP_014750052
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MRTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYTGSFIGQSAHFKMTSVCGH
VMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDK
EGENICFEVLDAVLPVMNKPRGTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNPEKESSLTLDWDRVRVFDREVAQMFLNITKMAKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANN
PYWAETVKSLLSEGINRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTISFSIGPERFTCVGKVVTSPGFTEIMPWHSIPLEESLPHCEKGDLFPIGE
IKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDPTSGPKWKMACNKCNVIVHFFENAHKVRVSADTCDLCEAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRR
PGGRLNPKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgtgctgatggtggcggagaagccgtccctggcgcagtccatcgccaagatc
ctctccagagggaacatgtcctctcgcaagggactcaatggtgcgtgctctgtgcacgag
tacactgggtccttcatagggcagagtgctcacttcaagatgacatcggtgtgtggtcat
gtcatgactctggatttcataggaaaatataacagctgggacaaagtggatccagcagaa
ctttttagtaaagctcccacagaaaagaaagaagctaatcccaaactgaccatggtgaag
tttttacaggtggagggcagaggctgtgattgtattgtcttgtggttggattgtgataag
gaaggagaaaacatctgttttgaagttcttgatgctgttcttcctgtcatgaacaaacct
cgtggcacagagaggacgatttacagagctaaattcagttccatcactgacacagacatc
tgcaatgccatgaatcacttgggagagcccaatcgcaacgaagctctgtccgtggatgcc
cgccaggagctggatttgaggattggctgtgccttcacaaggttccagactaaatatttt
caggggaaatatgggaatttagacagctccctcatctcctttgggccatgtcagacccca
acacttggattctgtgttgagaggcatgacaaaatccagtcatttaagcctgagacttac
tgggtgttgcaagctaaagtgaaccctgaaaaagaaagttctctcactttggattgggat
agagtgagggtttttgatcgtgaggttgctcaaatgtttctgaatataacaaagatggca
aaagaagcaaaggtagaatctgtgagtaaaaaagagaaagtgaaacagagaccactggct
ctgaacacagtagaaatgctccgagtagccagtgctgctttaggaatgggtccccaacat
gccatgcaaatagcagaacgtctttacactcaaggttatatcagctatcctcgaacagaa
actacccattatccagaaaactttgacctgaaaggatgtttgagacaacaagccaataat
ccttactgggcagaaactgtaaaatcattgctgtcagaaggcatcaatcgtccaaggaaa
ggccatgatgcaggagaccatcctcccatcaccccaatgagagctgcaacagaagcagaa
ttagggggagatgggtggcgactgtacgagtacataactcggcacttcattgccactgtc
agtgctgactgcaagtacctacaaaccaccatttccttcagtattggccctgaaagattt
acctgtgttggaaaggtggtaacttcaccagggttcacagaaattatgccatggcacagc
atcccattagaagagagccttccccactgtgagaaaggagatctttttccaattggtgaa
ataaagttgctggaaaagcaaaccagccctcctgattacctgacagaagcagaactgatc
actctgatggaaaagcatggcattggaactgatgccagtattccagtccacattaacaac
atttgccagagaaactatgtcacagtggagagtggtcgaagactaaagcctacaaacctt
ggcattgttctggttcatggttattacaaaatagatgcagaattggttcttcctacaatc
cgcagtgctgtagagaagcaactcaatttaatagctctgggtaaagcaaattatcatcag
gtcctggagcacacccttgacattttcaaaaggaaatttcactattttgtggattctatt
gcaggtatggatgaactgatggaagtgtctttttcacccttggctgccacaggcaagcct
ctttcccgctgtggtaaatgccatcgtttcatgaagtatattcaggccaagccaagtcgc
ctgcactgctctcactgtgatgacacctacagtcttccccagaatggtaccattaaactc
tacaaggagttgcgttgtcccctggatgactttgagctggtgctgtggtcatctggatcc
agaggaaagagctatccactgtgtccgtactgctacaaccatcctcccttcagggacatg
aaaaaaggcatgggctgtaatgagtgcacccaccccacgtgccagcattcccttagcatg
cttggaattgggcagtgcgtggagtgtgagaacggggttctggtgctggaccccacgtcg
ggccccaagtggaagatggcctgcaacaaatgcaacgtgatcgtgcatttcttcgagaac
gcccacaaggtccgcgtgtcggccgacacctgcgacctgtgtgaggcggcgctcgtggat
gtggatttcaacaaagccaaatctcccctgcctggtgatgagacccagcactcaggctgt
gtgttctgtgaccccgtgttccaggatctggtggagctgaaacacgcggccatgaggcat
cccatgcaccgtgggggacaagggaagaggcaggggcggggaaggggcaaaggccggaga
cctggaggaagactcaacccaaagaaacccaaggacaaaatggcagctctggctgcttac
tttgtatag
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