Sturnus vulgaris (common starling): 106864911
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Entry
106864911 CDS
T08833
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
106864911 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
svg01001
]
106864911 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
svg04054
]
106864911 (CIITA)
Enzymes [BR:
svg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106864911 (CIITA)
Protein kinases [BR:
svg01001
]
Serine/threonine kinases: Other
TAF1 family
106864911 (CIITA)
Pattern recognition receptors [BR:
svg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106864911 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
LRR_14
NB-ARC
nSTAND_NTPase5
RsgA_GTPase
NPHP3_N
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
106864911
NCBI-ProteinID:
XP_014750126
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MDSVFVPENGYLDLLHSDLDPLHLCTFFDPKSSGDEEDDFSTDLEVDANNYEQVNNVDFP
YESGDGFYPCSNTTDAYAKIAELVEYVLKDQQEKHVEDIFAGNLILDDIAAENTEKFPDI
KVQTCLKRTFLGSAAESYCDASEPKYKKIVEDPAAAAGNGSFFPMHLNSHPVGCTSLTNQ
HLSFSVPAAHGLERSLIIPGLSEPLPSECLPVSVRGYQENPEFAEPPQQILNFVLENGTS
DVIVYPVLASSMETFMSPSFPVNLCAQHMYATSPGIPDAAADKLAYLETFQEVQDSIIPS
EEPFKRPEQVETFCSSLKDYFRDTCKSVTMEQEVNLDHLFIDGTLVQSQTETKTGKNSAK
AMEKELVTCSLQEKEKIAIDRSQIFQIPQRKDLETKVIVVLGKAGMGKSILIQKICQDWS
NGEFPQFEFVFWFDCKQISLPEKQYSLKELLLEFFVKPQEGSKEIFEYILQNPDKALLIF
DGFKGLHDHENFPRCSASQSEKDLCSIKELLSGLIQKKILSGCTLLFTARPKDKLYQYMS
KVDKIIEMVGFSPQQRELYITKYFEESSYCDRALKLIRECEYLFSHCYSPVMCRFVCFLC
ERVLEMGEKSLPSTLTKVFLKYFQQKILQTDVTTTKNQESLATLARLAWCLGEKHQSAMK
SDLIPSEEVKEFALKYGFFLPFAFPRHSDSEEEEFGSTFSDFVIQNFLCAVHLLLAEELK
DRNLTKYLSFLSKKKKPFNWLDLMPRFLAGLVFLQDDTYLWSLSNEDEKQSTKKQKTLLK
YIRRLQINTLCPERLLELLHCVYETQNNYLLQHVALRIEPNLSFLGIALTPPDVHVLHSI
LKRSRKEFSLDLRNSSIDMQGLQALVSLKNVTSFRASLSDTVELWKSLEQTKDYELLRAS
TEKFVLDPFKAMTMKDISDLSNLVEMQEKMRNCVQEASGCTSYEIPAIRNLRKLEFALGP
ACGLQGLLKLVKILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNK
ITDLGAENLATALPSLSSLKTLSLYNNNICDFGAENLAKVLPALRSLRVLDVQYNKITAV
GAQQLTDSLRKCPHIKNLLMWTPTIPYGVFEHLQQLDSRISV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtatttgtgcctgaaaatggctaccttgatttactacacagtgatcttgat
ccattgcatctgtgtactttctttgatcctaagtcatctggagatgaagaagatgacttc
tctacagatcttgaagttgatgctaacaactatgaacaggtaaataatgtggatttccca
tatgaaagtggagatgggttctacccctgttccaacaccacggatgcttatgctaaaata
gctgaattagtcgaatatgtgctcaaggatcagcaggagaagcatgtcgaagacattttt
gcagggaaccttattttggatgacattgctgctgaaaacactgagaaatttcctgacata
aaggtgcagacatgtcttaaacgaactttcctaggttctgcagcagagagttactgtgat
gcttcagaacccaaatataagaaaatcgtggaagaccctgcagcggctgcagggaatgga
agtttctttcctatgcatctcaacagccacccagtgggctgcacctccctaactaaccag
cacttgtccttttctgttcctgctgcccatgggctggaaagaagcctcataattcctgga
ttgtcagaacctttgccctcagagtgcctaccagtcagtgtgagaggataccaagagaat
ccagagtttgcagaacctcctcagcagatacttaactttgttcttgaaaatggcacatct
gatgttatagtatatccagtgctggcatcttccatggaaacattcatgtctccaagtttt
ccagttaatttatgtgcacaacatatgtatgccacaagccccggaattccagatgcagca
gcagacaaattagcatatttagagacatttcaagaagttcaagattccataattccttct
gaagaacctttcaaaagaccagagcaagtggaaactttctgttcatcacttaaggattat
ttccgagacacatgcaaatctgtgaccatggagcaggaagtaaatctggatcacctgttc
attgatgggacacttgttcaaagtcaaactgaaaccaagactggaaagaatagtgcaaaa
gcaatggaaaaggagctggtaacctgcagcctgcaagagaaggaaaagatagccattgat
agaagccaaatatttcaaatcccacaacgtaaagacttagagactaaagtgattgtagtc
ctgggaaaagcaggaatgggcaaaagcattctcatccagaagatctgccaggactggtcc
aacggagagtttcctcagtttgaatttgtattttggtttgactgcaaacaaataagcttg
cctgagaagcaatacagcctgaaggaactgctgcttgaattttttgtaaaacctcaagag
ggaagcaaagagatctttgagtatatattgcaaaatcctgataaagcccttctgattttt
gatggttttaaaggattgcatgatcacgagaattttcctcgttgctcagccagccagtct
gaaaaggatttgtgcagtataaaggagctgctttcaggactcatccaaaaaaagatactc
agtggctgtactttattatttacagcaagaccaaaagacaaactgtaccagtacatgtcc
aaagtggataagattattgaaatggtaggattttcccctcagcagagagaattgtacata
accaaatacttcgaagaatcatcctactgtgatagagcactgaaattaatcagagagtgt
gagtacttgttcagtcattgttacagccctgttatgtgtagatttgtttgttttctctgt
gagagagtgcttgaaatgggagagaaaagtcttccttcaactcttactaaagtcttcctg
aaatattttcagcagaagatattacaaacagatgttacaaccacaaaaaatcaagagagt
cttgctaccctagcccgtctagcctggtgtcttggagaaaagcaccaaagtgccatgaaa
agtgatcttattccttctgaggaagttaaagagtttgctctgaagtatgggtttttcctg
ccatttgcattccccagacattcagatagtgaagaagaggaatttgggagcacattctct
gattttgtcattcagaatttcttgtgtgcagttcaccttttgttagcagaagagctcaag
gatagaaatctaacaaagtacctgtcttttctatccaagaagaaaaaaccttttaactgg
ttagatttaatgcctcgatttttggctggtttggtgtttctccaggatgacacctactta
tggtctctttcaaatgaggatgaaaaacaatcaactaagaagcagaagacactcttgaaa
tacattagaaggctgcagattaatactctctgtccagagaggttgctggagcttttacat
tgtgtttatgaaacacagaacaattatcttctgcagcatgtggccttaagaatcgagcca
aacttgtcttttctgggcatagctcttacaccacctgatgtccatgtactgcactctatt
ttaaaaaggtcaagaaaagagttttccttggatttacgaaacagcagcattgacatgcag
gggctgcaagccttggtcagcctaaagaatgtgacatcattcagggcctccctcagtgac
acagtcgagctctggaaatctttagaacagacaaaagactacgaactgctgagagcatcc
acagagaaatttgttcttgatccctttaaggcaatgacaatgaaggacatcagtgacctc
tccaaccttgtagagatgcaggagaagatgaggaattgtgtgcaagaagcatctggttgc
accagctatgaaattcctgccatcaggaacctcagaaaactggaatttgcgctgggtcca
gcatgtggccttcaaggattgctaaaactcgtgaaaattcttgcagcatttccatcactt
cagcatttagaccttgatgctctgagtgaaaatggcataggggatgaaggagcaaagagc
ctatctgaagtctttccaaccctgacatcactggaaacattaaatttatcgcagaataaa
ataacagatctgggtgcagagaacctcgctacagctctcccttccttgtcttccttaaaa
acactaagcttgtacaacaacaacatttgtgattttggagcagaaaatctggcaaaggtt
cttcctgcactgagatctttaagagtgctagatgttcaatataacaaaataactgctgtt
ggagcccagcagctgactgacagcctacgaaaatgtcctcatataaagaacttgctgatg
tggactcccaccattccctatggagtttttgaacaccttcagcagctggactccaggatc
agtgtgtag
DBGET
integrated database retrieval system
