Sturnus vulgaris (common starling): 106864962
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Entry
106864962 CDS
T08833
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03030
DNA replication
svg03410
Base excision repair
svg03420
Nucleotide excision repair
svg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106864962 (RFC5)
03410 Base excision repair
106864962 (RFC5)
03420 Nucleotide excision repair
106864962 (RFC5)
03430 Mismatch repair
106864962 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svg03032
]
106864962 (RFC5)
03036 Chromosome and associated proteins [BR:
svg03036
]
106864962 (RFC5)
03400 DNA repair and recombination proteins [BR:
svg03400
]
106864962 (RFC5)
DNA replication proteins [BR:
svg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106864962 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
106864962 (RFC5)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106864962 (RFC5)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106864962 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
106864962 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_24
AAA_22
AAA_11
AAA_assoc_2
DEAD
AAA_14
RuvB_N
DUF815
ResIII
AAA_5
AAA_30
AAA_19
DNAX_ATPase_lid
PhoH
AAA_7
TniB
ATPase_2
nSTAND3
TIP49
AAA_25
Gp44_lid
Thioredoxin_6
bpMoxR
AAA_28
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
106864962
NCBI-ProteinID:
XP_014750236
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MAPAGSANLPWVEKYRPQALSELVSHQDILSTVQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREREFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQ
EEGVDVTEDGMKALVTLSSGDMRRALNILQSTSMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKITELKALKGLALQDILTEIHLFVHRGGDWVWLWMILERPNLPLALT
ECFLLSTVDFPPSIRMQLLIKLADIEYRLAAGTSEKIQLSSLIAAFQVTRDLVVAEA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcgggtagcgcgaacctgccgtgggtggagaagtaccgtccgcaggcgctg
tccgagctggtgtctcaccaggacatcctcagcaccgtgcagcgcttcatcagcgaggac
cggctcccccatctgctcctctatgggccgcccggcacagggaagacatccaccatcctg
gcctgtgccaggcagctgtaccgggagcgggagttcggctccatggtgctggagctcaac
gcctccgatgaccggggcatcgacatcgtccgagggcccatcctgagctttgccagcacc
aggaccatctttaagaaaggcttcaagcttgtcatcctggatgaagccgatgccatgacc
caggatgctcagaacgccctgaggagagtgattgagaaattcacagaaaacactcggttt
tgcctcatctgcaactacctctccaagatcattcccgccctgcaatcccgctgcacccgc
ttccgctttggccccctgaccccggagctgatggtgccacggctgcagcacgtcatccag
gaggagggggtggatgtgaccgaggacgggatgaaggctctggtgacgctctcgagtggg
gacatgcgcagggccctcaatatcttgcagagcacctccatggcctttgggaaggtgaca
gaggagaatgtttatacctgtacgggacatcccctcaagtctgacatcgccaacatcctc
gactggatgctgaaccaggatttttccactgcctaccgcaaaatcacagagctgaaggcg
ctgaagggcctggccctgcaggacattctcactgagatccatctctttgtgcacagaggt
ggggactgggtctggctctggatgatcctggagaggccaaatttgcccctggccctcacc
gagtgtttccttctctccacagtcgacttccccccctccatccgcatgcagctgctgatc
aagctggcagacatcgagtaccgcctggctgctggcaccagcgagaagatccagctgagc
tccctcatcgccgccttccaggtcaccagggacctggtggtggctgaagcctga
DBGET
integrated database retrieval system
