Sturnus vulgaris (common starling): 106865099
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Entry
106865099 CDS
T08833
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svg03041
]
106865099 (DDX1)
03016 Transfer RNA biogenesis [BR:
svg03016
]
106865099 (DDX1)
Enzymes [BR:
svg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106865099 (DDX1)
Spliceosome [BR:
svg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106865099 (DDX1)
Transfer RNA biogenesis [BR:
svg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106865099 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
106865099
NCBI-ProteinID:
XP_014750449
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDTEKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYVGLCKAPEGSVVKSQHSGSAQVVQAQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLIATGKIN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTITQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttctcggaaatgggtgttatgcctgagatagcacaagccgtggaggagatg
gactggcttctccctacagatatccaagcagaatccatcccattgatcttgggaggtggt
gatgtacttatggctgctgaaaccgggagtggaaaaactggtgctttcagcattccagtt
atccagattgtttatgaaacactgaaagaccaaatggaaggcaagaaaggaaaagccact
attaaaactggaggagcagtgctcaataaatggcaaatgaacccctatgacagaggatca
gcttttgcgatcggatcggatggtttgtgttgtcaaagcagagagataaaagaatggcat
ggatgcagagcaactagaggcgtgactaaagggaaatactactatgaagtttcctgtcat
gatcaaggcttgtgcagagttggttggtcaactatgcaggcttcactagatctgggcact
gataaatttggctttggctttggtggcactggtaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacgattgggtgttacctagacacagaaaaa
ggacaaataaaattttccaaaaatgggaaggaccttggccttgcatttgaaatcccacca
catataaggaaccaagcgctttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggtgaagaagatttcaagtttccaccaaaagatggctacgttggtctttgcaag
gctcctgagggtagtgttgtaaaatcacaacactcaggaagtgcacaggtggttcaagca
cagaaccttccaaatgctccaaaagcattgattgtagaaccgtcaagagagctggcagaa
caaactttgaacaatgtgaagcagttcaaaaaatatgtcgataatcccaaattaagggag
ctgctaattattggtggagttgctgcaagagatcaactctctgtactggaacaaggcgtg
gatattgtcgttggaacccctggaaggctggatgacctgatcgcaacggggaagattaat
ttatctcaagttagattcctggttctggatgaagctgatggccttctcctccaaggttat
tcagatttcataaacaggatccacagtcaaattcctcagataacctcagatggaaagaga
cttcaggtcattgtgtgctctgccacactgcattcttttgatgtgaaaaaactgtccgag
aagatcatgcattttcccacctgggttgatttgaaaggagaagattctgtccctgaaact
gtgcaccatgtagttgtgcctgtgaatccaaaggctgataaactctgggaacggcttggc
aagaatcatatcagaactgatgaagtacatgcaaaagacaatacacgacctggcgcaaac
actccagaaatgtggtctgaagctattaaaattctaaaaggcgaatacactgttcgggca
atcaaagagcacaaaatggatcaagccattattttctgcaggactaaaatagattgtgat
aatatggagcagtactttatccagcagggcggaggccctgataggaagggacatcaattc
tcatgtgtctgtcttcatggtgatagaaaacctcaagaaagaaagcaaaacctggaacga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaattgat
attcatggtgttccatatgttatcaacgtgacactccctgatgaaaagcagaactatgtt
catcgaatcgggagagttggcagagctgagaggatgggtttggccatctcccttgtggca
aaagagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaagggtgttataac
actagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttaaactgcactattacccaagttgaaccagacataaaagtacca
gtggatgattttgatgggaaagttacgtatgggcagaaaagagctctgggcggtggactg
tataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgagaaa
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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