Sturnus vulgaris (common starling): 106865125
Help
Entry
106865125 CDS
T08833
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106865125 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svg03021
]
106865125 (CPSF3)
03019 Messenger RNA biogenesis [BR:
svg03019
]
106865125 (CPSF3)
Transcription machinery [BR:
svg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106865125 (CPSF3)
Messenger RNA biogenesis [BR:
svg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106865125 (CPSF3)
U7-dependent histone pre-mRNA processing factors
106865125 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
106865125
NCBI-ProteinID:
XP_014750487
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLCYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVSKISKKIDMDVYRKRMEIMLQDMFGEDCVSSKDDSVLCITVDGKTANLSLDTRTV
DCEPGSEDDESLREMVELAAQRLYDALSPVY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaagcgcaaagccgaggcgctgatcccggccgaggagagcgaccagctgctg
atccggcccctaggtgctggtcaagaagtaggaaggtcatgcatcattctggagtttaaa
ggaagaaaaatcatgcttgattgtggaatccatcctgggctggaaggaatggatgctctt
ccttacattgatttgatcgatccagctgagattgatctcctccttattagtcatttccat
ttagatcactgtggggctttgccatggtttttacagaaaacaagttttaagggacggaca
tttatgactcatgccacaaaagctatttacagatggcttctttcagactatgttaaagtc
agtaacatttcagcggatgacatgctatacacagaaacagacctcgaagaaagcatggac
aagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgc
taccacgcaggccacgttctgggagcagccatgtttatgattgaaatagctggcgtgaag
ctgttatatacaggtgatttctcaaggcaggaagacagacacctgatggcagctgagatt
cccaatatcaaacccgatattcttataattgaatccacgtatggcactcacattcacgag
aagagggaagagcgggaggcgagattctgcaacaccgttcacgacatcgtgaacaggggg
ggccgaggcctcatccctgtgtttgccctgggtcgggctcaagaactgctcctaatctta
gatgagtactggcagaatcatcctgaactccatgatatccccatatactatgcctcctct
ttggcaaagaaatgtatggcagtttatcagacatacgtcaatgccatgaatgacaaaatc
cgcaagcaaattaacatcaacaatccttttgttttcaagcatattagtaatctgaagagt
atggatcactttgatgacattggcccaagtgttgtcatggcttccccagggatgatgcag
agtggcttatccagggagttgtttgagagctggtgcacagataagagaaatggagtcatt
attgcagggtactgcgttgaaggaactcttgctaagcacatcatgtctgaacctgaagag
atcacaactatgtcagggcaaaaactcccactgaagatgtctgtggattatatttctttc
tctgctcacacagattatcaacaaacaagtgaatttatccgggctctgaaacctccacat
gtgattttagttcatggtgagcagaacgaaatggccagattgaaagcagcattgatacgg
gagtatgaggataatgatgaagttcatatagaagttcataatcctaggaatactgaagct
gtgacattaaacttcagaggagaaaagcttgccaaggtgatgggatctttagcagataag
aaaccagagcaaggacagaggatttctggaatcctagttaaaagaaattttaactatcac
atcctttctccatgtgacctctccaattacacggacttggcgatgagcacagtgacacag
acacaagccattccctacacaggccctttcaatctgctttgttaccagctgcagaaactc
accggtgatgtagaagaaatagaaatccaacaaaaaccagccctgaaggttttcaaaaat
attactgtgatccaggaaccaggcatggtagtccttgagtgggtggcaaatcctgctaat
gatatgtatgcagacactgtgacaacagtgatactggaagttcagtcaaatcccaaaata
cagaaagctgcagtaagtaagatttcaaaaaaaatagatatggatgtgtataggaagaga
atggagatcatgcttcaggatatgtttggagaggactgtgtgagttccaaagatgactct
gtcctgtgcatcacagtggatggaaagactgccaacctttccctggacactcggacagtt
gactgtgagccaggaagtgaagatgatgaatcccttcgtgaaatggtggaactagcagca
cagaggctttatgatgccctcagccctgtatactga
DBGET
integrated database retrieval system
