Sturnus vulgaris (common starling): 106865267
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Entry
106865267 CDS
T08833
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106865267 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svg03021
]
106865267 (POLR1A)
Enzymes [BR:
svg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106865267 (POLR1A)
Transcription machinery [BR:
svg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106865267 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
106865267
NCBI-ProteinID:
XP_014750680
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MRPPKVVPWRRLVGVTFGMYTAEEIRKLSVKPITNPQYLDNVGNPAINGLYDLALGPPDS
REVCATCMQNFSNCPGHFGHIELPLPVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLL
LSQLKVLEKGLLYAVHDLEIILNRFVEQCADATGSEIEEELNRHVQEILQNSEIRDRCSN
VKNVCECRNRLVSQFWKAHMGSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYHKSGREGI
LDETAGIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHESSGFSPDMFFL
DLLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVMKDAQVIRKLLVFMAKEQCQPIKFTEEI
QTETGEDSEPLDRSVLSTIPGQSIADKLYNAWIRLQSHVNIVFDSDMDKLITEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCR
HIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAITDKQYLVPKDGKPLPGLIQDHMVSGVSMTIRGCFFTREQYMELVYRG
LTDKKGKIKLFPPAIMKPQRLWTGKQVVSTLLINIVPDNCAPLNLTGKAKIGGRAWVKGP
AKGSLNLDSMCESQVIIRDGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLSCLG
RLFTAYLQLYRGFTMGIEDILVKREADYKRKKIIERSRQSGIQAVRAALNLPETASSEEV
QGKWQDAHLCKDQRDFNMVDMKFKEEVNSYNNEINKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLIVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQANQQFKAIKKWRARHQNS
VQREGGFLLFSRKKLASLKAQLPGGEIKNGRDPATLQLLKMWYELDEKKQRKYLKKTNKC
PDPSLGIWRPDTYFASVSETFENGVESYISKWESESSRSYVHPALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASTNIKTP
MMSIPVFNTKKALKKVKQLKKQLTRVCLAEVLHKVDIEESLHVKHKLNKHRLYKIKFHFL
PHEYYQEEKCVKPRQILHFMETRFFKVLLEAIKKKTAKMASFNEVSTRKTTRKDLDDDQD
KTLNGREGVAEEEENIVDAEADEGDGDATERKRRKNQEEEVDYESEEENGEENANENLED
EEAESEKEGETPGAEEDQNRAEGEDSQHLPFVSQTKKGKDRLLQSAEVRVSAVVESHPSI
QDYMFDTKKELWCEVSLALPLTKVYFDLSSLLASLARSTVIHEVKGITRCLLNESTNREG
EKEFVLQTEGINLAELFRYSDILDLNRLYCNDIHAMAKHYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGIYKPLNRIGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcccaaagtggtgccatggcggcggctggttggggtgaccttcgggatgtac
acggccgaggagatccggaaactgagtgtgaagcccataacaaaccctcagtacctggat
aatgtggggaatccggctataaatggtctgtacgacctggccttgggacccccggactcc
agagaagtgtgtgcgacttgcatgcagaacttcagcaactgccccggacactttggccat
atagagctgcctctgcctgtctacaaccccctgttcttcgataaattataccttttaatc
cgaggttcttgtttgaattgccacatgctgacatgtcctcgagccgtggttcacctactg
ctaagtcagctgaaggtgctggagaaggggttgctttatgctgtccatgaccttgaaatc
attttgaacaggtttgtagagcagtgtgcagatgcaacaggctcagaaattgaagaagag
ttaaatcgtcatgttcaggaaatattacagaactctgaaataagagatcgatgttcaaat
gtcaaaaatgtgtgtgagtgtagaaatagactggtatcacagttttggaaagcacacatg
ggttcaaagaagtgcccaaactgcaaatccaggagatcactggtgcgaaaggagcacaac
agcaagctgacagtaacctatccttctacagtgtaccataagtcaggaagggaaggcatt
ctggatgaaacagcaggtattgatgaaagccagttagggaagagaggatacctgacacca
atgactgccaaggaatacatcctggctctgtggaagaatgaaggtttctttctgcgttat
ctcttccctgggatggatccccatgaaagttcaggattcagtccagacatgtttttttta
gacctactcgtggttccaccttcaaggtatcgtcctgtaaatcgtgttggagatcgcctg
ttcacaaatgggcagactgtgaacttgcaggctgtgatgaaagatgcccaagtgataagg
aagctcttggttttcatggccaaagaacagtgccagccaataaaatttacagaagaaatt
caaacagagacaggagaggatagtgaacctctggaccgttctgtgctgtcaacgattcca
ggacagagcattgcagataagctgtacaatgcttggatacgtctgcagagccatgtcaac
attgtgtttgatagtgacatggacaagctgataacagaaaaataccctggtattcgtcag
ctgttggagaagaaggaggggctgttccgcaagcacatgatggggaagcgcgtggatttc
gctgctcggtccgtcatttgccctgacatgtacattgggaccaacgagattggcatccct
atggtatttgccaccaaactgacttaccctcagcccgtcactccctggaatgtcaaggag
ctgaggcaggctgtgatcaatggccccaaggtgcaccccggggcctccatggtcattaac
gaggacgggtctcgcacggtgctgagcgccaccagcctgacccagcgcgaggccatcgcc
aagcagctcctcaccccctcctcgggggcaccccagacgggcctcaagattgtgtgtcgg
cacattaagaacggggatgtgctgctgctgaaccggcagcccacgcttcacagaccctcc
atccaggctcaccgcgcccggatcctgcccggggagaaggtgctgaggctccactacgcc
aactgcaaggcttacaacgctgactttgatggggatgaaatgaacgcccacttccctcag
agcgagctgggcagagcagaagcctacaccttagccatcactgacaaacagtacctggtg
ccaaaggatgggaagccacttcctggtttgatccaggatcacatggtttctggagtcagc
atgacaatccggggctgctttttcaccagagagcagtacatggagcttgtgtaccgaggg
ctgacagacaaaaaaggaaaaattaaactctttcctccagccattatgaagccacagcga
ttatggacaggaaagcaggttgtttccactttgttaataaacatcgttccagacaactgt
gctccactgaatttgactgggaaagcaaaaattggtgggagagcctgggtaaaaggacct
gcaaaaggatctctgaatcttgattcaatgtgtgaatctcaggttattatcagagatggg
gagttactgtgtggagtcttggacaaagctcactttggcagctctgcctatgggctggtc
cactgctgctatgagatctatgggggtgaaaccagtgggaaagtgctgtcgtgtctggga
cgcctcttcactgcttacctgcagctgtacaggggatttaccatggggattgaagatatt
ttggttaaacgtgaagcagactacaaaagaaaaaaaatcattgaaaggtcaaggcagagt
ggtattcaagctgttagagctgctcttaatttgccagaaacagcatcatctgaggaggtc
caagggaagtggcaggatgcccatctgtgcaaagaccagagggatttcaacatggttgat
atgaaattcaaggaggaagtaaacagttacaacaatgaaatcaacaaggtttgcatgccc
cttggtctccacaggagctttccagagaacaacttgcagttgatggtacagtcaggagcc
aaaggatccactgtaaacacaatgcagatttcttgtttgctgggccagattgagctggaa
ggccgaagacccccactgatggcatctggcaaatcactgccatgtttccagccttatgat
ttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcaaaccttct
gagttcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaaacc
agccgttctgggtacctgcaaaggtgtattatcaaacatttggaaggactgatagttcag
tatgacctgactgtacgggacagtgatggcagcgtggtgcagtttctgtatggagaagat
gggcttgatatccctaaaactcagttcttacagcctgagcagtttcctttcattgcagaa
aactatgaggtcatccagaagacaaaccatctggatgaagctttagcaaggatggagtct
caccaagctaaccagcagttcaaagccatcaagaagtggcgagccagacaccaaaactct
gtgcaaagagaaggaggttttctgttgttttcccgaaagaaactggcaagtttgaaagca
cagcttccaggaggtgaaataaagaatggaagagatcctgctactttacagttgttgaag
atgtggtatgagcttgatgagaagaaacaaaggaagtatctgaagaagacaaataagtgt
cctgacccaagccttgggatttggcgtccagatacttattttgcatccgtttcagaaaca
tttgaaaatggagtggaaagctacatcagtaaatgggaatctgagagcagccggagttat
gttcacccagcactttcatctgatagattaaaggatctgttgtatttaaagtggcagcgt
tctctttgtgacccaggagaagctgtagggcttcttgctgctcagagtattggggaacct
tcaacacagatgactctgaacacatttcactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggttgcgggaaatactgatggtggccagcacaaacattaaaacacca
atgatgagtattcctgtgttcaataccaagaaagctctcaagaaggtgaaacagcttaag
aaacagctcacaagagtgtgcttagctgaggtcttgcacaaagtggacattgaggaatcc
cttcatgtgaagcacaagctgaacaagcatcgcctctacaaaatcaaattccatttcttg
ccccatgaatattaccaagaggagaaatgtgtgaagcccaggcagatcttgcacttcatg
gaaacaaggttctttaaagttcttctggaagcaattaaaaagaagactgcaaagatggca
tcttttaatgaagtcagcactcggaagacaactcggaaggatttagatgatgaccaagac
aagacactgaatggtcgggaaggtgtagcagaggaagaagagaacattgttgatgcagaa
gctgatgaaggtgatggtgatgctacagaaagaaaacggaggaaaaaccaggaagaagag
gttgattatgagagcgaagaagagaatggggaagaaaatgctaatgagaatctggaagat
gaagaggctgaatctgaaaaagaaggggagactcctggtgctgaagaggatcagaacaga
gcagagggtgaagattctcagcatcttccctttgtgtctcagactaaaaaagggaaagat
cgtttgcttcagtcagcagaggtgcgagtgagtgctgttgtggagagccacccatccata
caggattacatgtttgacaccaaaaaggagctctggtgtgaggtttccttggcattgcca
ctgaccaaggtgtactttgacctctcgtccctgctggcatccctggcacgcagcacggtg
atccacgaggtgaagggcatcacacgctgtctgctgaatgaaagtaccaacagggaggga
gagaaggaatttgttctccagacagaagggataaacctggcagagctcttcagatactct
gatattttggacctgaacagactttattgcaatgatatccatgccatggctaagcattac
ggaattgaatcagccctaagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcgacacctttcacttgtggcagattacatgtgttttgaagga
atttataaaccactgaatcgcattggaattcagtccaactcctcccctctgcaacagatg
acgtttgaaaccagctacaaattcttgaaggaagcaaccatgatgggtgcccacgatgag
ctgcgatccccctcggcctgcctggtggttggaaaagttgtcaaaggagggactggtttg
tttgacctcaagcagcccctgacatag
DBGET
integrated database retrieval system
