Saccharomonospora viridis: Svir_00040
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Entry
Svir_00040 CDS
T00980
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
svi
Saccharomonospora viridis
Pathway
svi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Svir_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svi03400
]
Svir_00040
DNA repair and recombination proteins [BR:
svi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Svir_00040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
SbcC_Walker_B
DUF2813
Motif
Other DBs
NCBI-ProteinID:
ACU95098
UniProt:
C7MRN6
LinkDB
All DBs
Position
4827..5999
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AA seq
390 aa
AA seq
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MYLRHLQVTDFRSWEHVDLPLAQGPTVLVGPNGQGKTNLLEAIGYISTLSSHRVATDAPL
VRHGCDRALVRAAVVNEGRELTVELEIAPGRANRARINRGAVGKPRDVLGILRTVLFSPE
DLALVRGDPSERRRFLDDLLVQRAPRYAGVRSEYDRVLRQRNALLKSVGRAGGRRGAREE
TDPYALSTLQVWDNHLASAGAELLAARLNLVAELGPYVASSYADVAPDSRPARIAYRSSL
GGALPEGWGTPDGPEASTEQLGEILLRVLGEVRETELERGVSLIGPHRDDLELMLGEAPA
KGYASHGESWSFALALRLASYRLLRNESGGEPVLLLDDVFAELDSRRRARLAEVATKAEQ
VLVTAAVDEDVPVEFAGVRYAVSNGEVTRA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgtatctgcggcacctccaggtgaccgatttccggtcgtgggagcacgtggatctcccg
ctcgcacagggacccaccgtgctggtgggccccaacgggcagggaaagaccaacctgctc
gaggccatcggatacatctccacgttgagttcgcatcgggtggccacggacgcaccgttg
gtgcgacacggttgtgatcgcgcgttggtacgtgccgcggtggtgaacgagggacgggaa
ctcaccgtcgagctggagatcgcaccgggccgggccaaccgcgctcggatcaaccgcggc
gcggtcggcaaaccacgtgacgtgctcggcatccttcggacggtgttgttctccccggag
gatctggcactcgtgcgcggtgatccctccgaacgacggcggttcctggacgacctgctc
gtacaacgcgctccgcgatacgcgggggtccgttcggaatacgaccgtgtgctgcggcag
cgcaacgccttgttgaagagcgtgggtcgcgccggtgggcgtcggggagcccgggaggag
accgatccgtacgcgttgtccacgcttcaggtgtgggacaaccacctggcttccgcgggg
gccgagttgttggcagcgcggctcaatctggtcgccgagctggggccctatgtggcttcg
tcctatgcggacgtggctcccgactcccgacctgcccggatcgcctaccgctccagcctg
gggggtgcgttgccggagggttgggggacgcccgacggaccggaagcgtcgacggagcag
ctcggcgagatcctgctccgggtgctcggtgaggtccgggagaccgagctggagcgcggg
gtgagtctcatcgggccgcaccgggacgatctcgagttgatgttgggcgaggcccccgcg
aagggttatgcgagccacggggagtcgtggtcgttcgcgttggcgctacgactagcgtcg
tatcggctcttgcggaacgagtcgggcggtgaaccggtgctgctgttggacgacgtgttc
gccgagctcgacagcaggcgtcgggcccgattggccgaggtggcgacgaaggccgagcag
gtgttggtgacggcggccgtcgacgaggacgtacccgtcgaattcgcaggcgtacggtat
gcggtctcgaacggcgaggtgacacgtgcctga
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