Saccharomonospora viridis: Svir_04270
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Entry
Svir_04270 CDS
T00980
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
svi
Saccharomonospora viridis
Pathway
svi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Svir_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svi03021
]
Svir_04270
03400 DNA repair and recombination proteins [BR:
svi03400
]
Svir_04270
Enzymes [BR:
svi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Svir_04270
Transcription machinery [BR:
svi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Svir_04270
DNA repair and recombination proteins [BR:
svi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Svir_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ACU95503
UniProt:
C7MTX5
LinkDB
All DBs
Position
413769..414845
Genome browser
AA seq
358 aa
AA seq
DB search
MLISQRPTLSEETVNETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTEIILNLKELVVSSEEDEPVTMYLRKQGPGEVTAADIVPPSGVTVHN
PDLHIASLNGKGKLEIELVVERGRGYVPALQNKQAGAEIGRIPIDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVLDVETKPSITPRDAVASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAYAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKMK
LAGLGLTLKDSPPGFDPTAAASTYGGAGTSQTWGAQPSTGLPDTGHDDGQDYAETEQL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatttcccagcggccgaccctcagcgaggagacggtcaacgagacgcgctcacgg
ttcaccatcgagccgctcgagcctggcttcggttacaccttgggcaactcgctgcggcgg
accctgttgtcgtccattccgggtgccgcggtcacgagcatccgtatcgacggcgtgctg
cacgagttctccaccgttcccggggtgaaggaagacgtcaccgagatcatcctgaacctc
aaggaactcgtcgtctcctctgaagaggatgagcccgtcacgatgtacctgcgcaagcag
ggtcccggcgaggtcaccgctgccgacatcgtgccgccgtccggcgtcaccgtgcacaac
ccggatctgcacatcgcgtcgttgaacggcaagggcaagctcgagatcgagctggtcgtc
gaacgcggccgcggttatgtgcccgcgcttcagaacaagcaggctggcgcggagatcggg
cggattccgatcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagttggtgctcgacgtggagaccaagccg
tcgatcaccccgagggacgctgtcgcctcggcgggtaagacgttggtcgagctgttcggt
ctcgcgcgcgagctgaacgttgatgccgaaggcattgagatcggtccgtcgccgcaagag
gctgacaccatcgccgcctacgcgatgccgatcgaggacctcgacctgacggtgcggtcg
tacaactgcctgaagcgtgagggaatccacacggttggcgagctggtgtcccggagtgag
gccgacctgctcgacatccgtaacttcggcgctaagtcgatagacgaggtgaagatgaag
ctcgccggtctcggcttgacgctgaaggacagcccgcctggattcgaccccacggctgct
gcctccacctacggtggtgctggtacaagccagacctggggtgcgcagccctcgacgggc
cttccggacactggccacgacgacggccaggactacgcagagacggagcagctgtaa
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