Saccharomonospora viridis: Svir_08230
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Entry
Svir_08230 CDS
T00980
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
svi
Saccharomonospora viridis
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svi03032
]
Svir_08230
03400 DNA repair and recombination proteins [BR:
svi03400
]
Svir_08230
Enzymes [BR:
svi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Svir_08230
DNA replication proteins [BR:
svi03032
]
Prokaryotic type
DNA Topoisomerases
Svir_08230
DNA repair and recombination proteins [BR:
svi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Svir_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Lzipper-MIP1
ZT_dimer
HALZ
Mei5
Motif
Other DBs
NCBI-ProteinID:
ACU95883
UniProt:
C7MWM4
LinkDB
All DBs
Position
840852..843335
Genome browser
AA seq
827 aa
AA seq
DB search
MARRKKPITRVDPAAFDQAGARVFDNPVTTEIEESYLEYAYSVIHSRALPDARDGLKPVH
RRILYSMYESGYRPNHAYVKSSRVVGDVMGRYHPHGDTAIYDAMVRLAQDFSMNVPLVDG
HGNFGSPDDGPAASRYTEARMSSEAMLLVDELGEDTVDFRPNYDGSLQEPSVLPAAFPNL
LVNGTSGIAVGMATNMIPHNLGEIVAAARWLINHPNASLDKLMEFVPGPDLPTGGQLLGL
DQVRKAYETGRGVVRMRAKATTGPIEGSRRQGITVTELPYGVGPEKVIERITEEVNKTKR
LTGIADVKDLTDRENGTKLVIECKVGVNPQALLADLYRLTPLEQSFGINNLVLVDGQPRT
LGLKELLEVFLAHRYEVVTRRTRYRRRKREERLHLVEGLLKALVDIDKVIKLIRGSENAQ
AAKEGLMKRFKLSEVQAAYILDTPLRRLTKYDKLELESEQDRLRKEIAELTEILDDEKVL
KRVVSKELAKVAKDFAVPRRTALIDGDLKEVLAASKPAGPLEVADDPCQVILSSTGLVAR
TAAESEEAVEGRRRSGRARHDAIAAMVHTTARGQVLLVTNRGRAFKTDVLPLPVLPESSG
TVSLRDGVDVRELAPLERDERVVGLAPLGEQAQGSPGLALGTRHGVVKVCAPDWPVRSDE
FDVITLKDGDEVVGATWLTDGAETLTFVTSQASLLRFDASLVRPQGLRGGGVAGINLPKD
SEVVFFGAVRTDDAEHGEPMVVTATGETVKVTPLSQYPAKGRATGGVRAHRFLKGETRLV
LAWVGPRPVGSTKRGESVELPEVDPRRDGSGAAHPGPDVVGHQIERP
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcgcaagaaacccatcacccgcgtcgacccggccgccttcgatcaggcgggc
gcgcgtgttttcgacaacccggtgaccaccgagatcgaggagtcgtacctggagtacgcc
tactcggtgatccattcccgtgcgctgccggacgcgcgcgacggactcaagcccgtacat
cgccgcatcctgtactcgatgtacgaaagcggctatcgccccaaccacgcctacgtgaag
tcgtcgcgtgtggtcggtgacgtgatgggccgctaccacccgcacggcgacaccgccatc
tacgacgcgatggtgcggttggcgcaggacttctccatgaacgtcccgttggtggacggg
cacggcaacttcggaagcccggacgacgggcccgcggcctcgcggtacaccgaggcccgg
atgtcctccgaggccatgctgctggtggacgagctgggcgaggacaccgtcgacttccgc
ccgaactacgacgggtcgctccaggagccgtcggtgctgcccgcggcgttccccaacctg
ttggtcaacggcacctcgggcatcgcggtcggcatggcgaccaacatgatcccgcacaac
ctcggtgagatcgtggccgcggcgcggtggctcatcaaccatccgaacgcctcgctggac
aagttgatggagttcgtgcccggccccgacctgcccacgggcggtcagctgctggggctg
gatcaggtgcgcaaggcgtacgagaccgggcgcggggtcgtccgcatgcgcgcgaaggcg
acgaccggtcccatcgagggcagccgtaggcagggcatcacggtcaccgaactgccctac
ggtgtgggcccggagaaggtgatcgaacgcatcaccgaggaggtcaacaagaccaagcgg
ttgaccggcatcgccgacgtcaaggacctcaccgaccgggagaacggcacgaaactcgtc
atcgagtgcaaggtcggggtcaacccacaggccctgttggccgacctctaccgactcacc
ccgctggagcagtcgttcggcatcaacaacctcgtcctcgtcgacggccagccgcgcacg
ttggggctcaaggaactgctggaggtgttcctggcccaccgctacgaggtcgtcacccgg
cgtacgcgctaccgccgtcgtaagcgcgaggaacggctgcacctggtggagggcctgctc
aaggccctggtcgacatcgacaaggtcatcaagctcatccggggcagcgagaacgcgcag
gccgccaaggagggcctgatgaagcggttcaagctgtccgaggtccaggccgcgtacatc
ctcgacacgccgctgcgcaggctcaccaagtacgacaagctcgaattggagtccgaacag
gacaggctccggaaggagatcgcggagctgacggagatcctcgacgacgagaaggtgctc
aagcgggtcgtgtcgaaggaattggccaaggtggccaaggacttcgccgtcccgcgtcgc
acggcgttgatcgacggtgacctgaaggaggtgttggccgcctccaagccggcgggcccg
ttggaggtcgccgacgatccgtgccaggtgatcctgtcgtccaccgggttggtggcccgg
accgcggcagagtccgaggaggcggtcgagggccgcaggcgcagtggccgggcccgacac
gacgccatcgccgccatggtgcacaccaccgcgcgaggccaggtgttgttggtgaccaac
cggggccgcgcgttcaagaccgacgtgttgccgttgccggtgctgccggagtcgtcgggc
acggtgtcgttgcgggacggcgtggacgtgcgggaactcgccccgttggagcgtgacgaa
cgggtggtgggactggccccgttgggtgagcaggcgcaaggctcgccggggttggcgttg
ggtacccggcacggtgtggtgaaggtgtgcgcgcccgactggccggtgcggtccgacgag
ttcgacgtcatcacgctcaaggacggtgacgaggtggtgggtgccacgtggctcaccgac
ggtgcggagacgctgacgttcgtgacgtcccaggcgtcgctgttgcgtttcgacgcctcg
ctggtgcggcctcagggactgcgcgggggcggggtcgcggggatcaacctgcccaaggac
tccgaagtggtgttcttcggggcggtgcgcaccgacgatgccgaacacggtgagccgatg
gtggtgacggcgaccggggagaccgtgaaggtcaccccgctgtcccagtacccggccaag
ggccgtgcgaccggtggggtgcgggcgcatcggttcctcaagggtgagacgaggctcgtg
ctggcctgggtcggtccgcgtcccgtcgggtcgacgaagcggggagagtcggtcgagttg
cccgaggtcgatccgcgccgtgacggttcgggagccgcccaccccggccccgacgtcgtg
ggtcaccagatcgaacgcccgtga
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