Saccharomonospora viridis: Svir_10720
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Entry
Svir_10720 CDS
T00980
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
svi
Saccharomonospora viridis
Pathway
svi03030
DNA replication
svi03430
Mismatch repair
svi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Svir_10720
03430 Mismatch repair
Svir_10720
03440 Homologous recombination
Svir_10720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svi03032
]
Svir_10720
03400 DNA repair and recombination proteins [BR:
svi03400
]
Svir_10720
Enzymes [BR:
svi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Svir_10720
DNA replication proteins [BR:
svi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Svir_10720
DNA repair and recombination proteins [BR:
svi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Svir_10720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DUF7508
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACU96128
UniProt:
C7MZ07
LinkDB
All DBs
Position
complement(1102767..1104479)
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AA seq
570 aa
AA seq
DB search
MQLAFDELGTPLREVTFVVVDLETTGVTPDGAGITEIGAVKVRGGEVVGEFATLVDPGVP
IPPQIVALTGITPAMVRSAPRIEQVLPTFLEFVSGAVLVAHNAGFDVSFLKAACQTHGYE
WPKPTVVCTLKLARRVLGRQETRGHRLSTLASLFGARSTPKHRALDDAKATVDVLHGLLE
RVGPLGVQSLEELLDYLRAVTPAQRRKRGLAAHLPERPGVYLFRGPSDEVLYVGTARNLR
RRVRQYFTASDNRGRIREMVALAERVDAVECSHALEAAVRELRLLAAYRPPYNRRSRNPS
KVWWVVLTDEPFPRLSVVRQPRDGALGPFTSRNSARAVADTLADLARLRTCTRRIPATGA
AGPSCVLAELGSCGAPCIGAQTAEDYRLSVRLVSDLIDGVDTALLRRGHEQLDALSAIQH
FERAARRRDELVAVLRAVDKRHRLAALASLEELVAASPDGSGGWEFAVVRYGRLASAGVA
RRGVPPMPVVDALVDSAETVLPEPGPLRGANGEETALLWRWLTRPGVRLVRTSAPWAEPV
HGAGRWRAWLDAADTATALEAIGHGDPAAR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgcgttcgacgagctgggaactcctctgcgtgaggtcacgttcgtggtcgtc
gacctggagaccacgggcgtcactcccgacggagcgggcatcaccgagatcggcgcggtg
aaagtccggggcggcgaggtggtgggggaattcgccaccctggtcgaccccggcgtgccg
atcccgccacagatcgtcgcgttgaccggaatcaccccggccatggtgcgttcggctccg
cgcatcgaacaggtgcttcccacgttcctggagttcgtctccggtgcggtgctggtggcc
cacaacgcggggttcgacgtctcgttcctcaaagcggcctgccagacccacggctacgag
tggccgaaacccaccgtggtgtgcacgttgaaactcgcgcggcgggtgctcgggcgacag
gagacccgaggacaccgcctgtcgacgctggcctcgttgttcggggctcgaagcaccccg
aagcatcgagcgctcgacgatgccaaagccaccgtcgacgtcctgcacggcctgctggaa
cgcgtgggccccctcggcgtgcagtcactggaggagttgctcgactacctgcgcgccgtc
accccggcgcagcgtcgtaagcgcggtctcgccgcgcacctgcccgaacgaccgggtgtc
tacctgttccgcggcccgtccgacgaggtgctctacgtcggcaccgcacgcaatctgcgt
cgacgggtacggcagtacttcaccgcctccgacaaccggggtcgcatcagggagatggtg
gccctggcggaacgggtggacgccgtggagtgctcccatgcgctggaggcggccgtgcgg
gaactgcggctgttggcggcctatcgccctccctacaaccgccgttcccggaatccgagc
aaggtgtggtgggtggtcctcaccgacgaaccgttcccccgactgtcggtggtgcgacag
ccccgtgacggtgcgctcggaccgttcacctcccgcaacagtgccagggccgtggccgat
acgctcgccgacctggcccggctacggacgtgcacccgccgtatccccgccacaggcgcc
gctgggccgtcctgcgtactcgccgagctgggcagctgcggagcaccgtgcatcggcgcc
cagacggccgaggactaccgcctttcggtgcgtctggtcagcgatctcatcgacggggtg
gacaccgcactccttcgacggggacacgagcaactggacgcgctctcggcgatccagcac
ttcgaacgcgcggctcgtcgtcgtgacgagttggtcgcggtgttgcgcgcggtggacaag
cgacacaggctggcggcattggcctccctcgaggagctcgtggccgcctctcccgacggt
tcgggagggtgggagttcgccgtcgtgcgctacggcaggttggcgtccgcgggagtcgcg
cgccgcggcgtaccccctatgcccgtcgtggacgcgctcgtcgactccgccgagacggtc
ctccccgagcccggcccgttacgcggcgcgaacggtgaggaaacggcgttgctgtggcgc
tggctgacccggccgggggttcggctggtgcgtacctcggcgccgtgggccgaaccggtt
cacggggcaggccgatggcgggcctggctcgacgccgccgacacggcgacagcgctggaa
gcgatcggccacggcgacccggccgcacgatga
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