Saccharomonospora viridis: Svir_11580
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Entry
Svir_11580 CDS
T00980
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
svi
Saccharomonospora viridis
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svi03000
]
Svir_11580
Transcription factors [BR:
svi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Svir_11580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
Sigma54_DBD
MarR
HTH_26
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACU96214
UniProt:
C7MZU6
LinkDB
All DBs
Position
complement(1189987..1191024)
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AA seq
345 aa
AA seq
DB search
MGKHALDGIRLADIAELAKVSEATVSRVLNGKPGVAAATRQSVLAAMDQLGYERPPRARQ
HNAGLIGLIIPELDNPIFPAFAQVIDRTLVMRGYRSVLCTQAPGGATEDEFIETLTARGV
SGIVFVSGLHADTTADHDRYRRLIDSGVPVVFLNGYAPDVKAPFFSDDDRAAVELAITHL
RELGHERIGLAVGPKRFVPVQRKAEQFRRLMAPVLGSAAAVDELIVHTLFSVEGGHSAAW
TLLERGCTAAVCGSDLMALGAIRVARRRGLEVPRDFSVVGYDDSPLIAFTDPPLTTIQQQ
VSAMATAAVRTLLDEIAGVEPPAEEYLFQPELVVRGSTAACPDRT
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacacgccctcgacggcattcgtctggctgacatcgccgaattggcgaaggtc
agcgaggcgaccgtgagccgcgtgctgaacggtaagccgggggtcgcggcggccacccgg
cagtccgtgctcgcggcgatggaccagctcggctacgaacggcctccgcgcgcacggcag
cacaacgcggggctcatcggcctcatcatccccgagctcgacaacccgatcttccccgcg
ttcgcgcaggtgatcgaccggacattggtgatgcgcgggtaccggtcggtgctgtgcacc
caggcaccgggcggggccacggaggacgagttcatcgagacactcaccgctcgaggtgtg
tcgggcatcgtgttcgtgtccggtttgcacgccgacaccaccgccgaccacgaccggtac
cgacgactcatcgacagtggtgtgccggtggtgttcctcaacggttacgcgccggacgtg
aaggccccgttcttctccgacgacgaccgcgccgccgtggaactggcgatcacgcacctg
cgggaactcggccacgaacgcatcggactggccgtggggccgaaacggttcgtgcccgta
cagcgcaaggccgagcagttccgccggctcatggcccccgtgctcggcagcgcggcggcg
gtcgacgagttgatcgtgcacaccctgttctccgtggagggtgggcattcggccgcgtgg
acgttgctggaacgagggtgcacggcggcggtgtgcggtagtgacctgatggcgctcggc
gcgatccgggtggcgcgcaggcgcggtctggaggtgccgagggacttctccgtggtcggc
tacgacgactcaccgctcatcgccttcaccgatccgccgttgaccacgatccaacagcag
gtgagcgcgatggccacggcggcggtgcgcacgctgctggacgagatcgcgggggtcgaa
cccccagccgaggagtacctgttccaaccggagctggtggtacgcgggtcgaccgccgcc
tgccccgaccggacgtag
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