Saccharomonospora viridis: Svir_16230
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Entry
Svir_16230 CDS
T00980
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
svi
Saccharomonospora viridis
Pathway
svi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Svir_16230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svi02000
]
Svir_16230
Transporters [BR:
svi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Svir_16230
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ACU96658
UniProt:
C7MT21
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All DBs
Position
complement(1669206..1670756)
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AA seq
516 aa
AA seq
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MFDTPLQRRSFLLGALATAATPVLAACGGASSAATEPTGPPRRGGRLRVGVTGGGASDTL
DPHIPATNPDIARVRNLYEPLVYRDHDYKLEMLLAESLTSSEDAMTWTATLREGVRFCDG
RPVTPADVRATFRRIMDPDDPKSGAASLTMLDEVVPTGDRTVEFRLSEPCSVFDDYLAQY
SLGIVPEDFSLDRPVGTGPFRVQSFSPGLQSVFVRNEHYWRPGRPYLDELVLINFGEDDA
RINALLSSQVDAIDQVPMALVEVLRSDDRLRILSSETGTWLPFTMRVDRPPFDDVRVRQA
LRLVVDREQMVNQVLSGQGRVGNDLYAPFDPAYASHLPQRRQDLAKARSLLREAGHPQLE
VELVTAPIQAGAVEAAQVFQQQAKAAGITVHLRRLDTTTFFGENYLSWDFAQSFWYTRNY
LPQVASGALPDAPYNETHWDDAEFQDLVDRARRTLDEAERTELLHEAQRIEYERGGNIIW
GFVNQVDAHQVYVAGLVPDRTGLPLSGYSFGDVWLG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgacacacctctacagagaagatctttcctgctcggtgccctggccaccgcggcg
acaccggtgctcgccgcgtgcggcggtgcgtcaagcgccgccaccgaacccaccggaccg
ccccgccgcggtgggaggcttcgggtgggggtcacgggcggcggcgcctccgacacactc
gatccccacatccccgccaccaaccccgacatcgctcgggtgcgcaacctgtacgaaccg
ctggtctaccgtgaccacgactacaagctcgagatgctgctcgccgagtcgctcacctcg
tccgaggacgcgatgacgtggacggcgacgttgcgcgagggcgttcggttctgcgacggc
cgcccggtcaccccggccgacgtgcgggccacgttccgacgcatcatggaccccgacgat
ccgaagagcggcgccgccagcctcacgatgctcgacgaggtggtacccaccggcgaccgc
accgtggagttccggctctccgagccgtgcagcgtgttcgacgactacctggcccagtac
tcgctcggcatcgtgcccgaggacttctcgctcgaccggccggtgggtacgggaccgttc
cgggtgcagtcgttctcccccggcttgcagagtgtgttcgtgcgcaacgaacactactgg
cgccccggcaggccttatctcgacgaactcgtcctcatcaacttcggtgaggacgacgcc
cgcatcaacgcgctgctttcgtcgcaagtggatgcgatcgaccaggtaccgatggcgttg
gtggaggtgttgcgcagcgacgatcggctgcgcatcctcagttcggagacgggcacctgg
ctcccgttcaccatgcgggtggaccgtccgccgttcgacgatgtccgggtgcgccaggca
ctccggctggtcgtcgaccgcgaacagatggtcaaccaggtgctcagcggacagggccgc
gtgggaaacgacctgtacgcgccgttcgaccccgcctacgcctcccacctaccccaacgg
cggcaggatctggccaaggctcggagtctgctgcgcgaggccggacacccacagctggag
gtggaactggtgaccgcgccgatccaggccggcgccgtcgaagcggcgcaggttttccaa
caacaggccaaggcggccggaataacagtccacttacgacgattggacaccaccaccttc
ttcggggagaactatctgagctgggacttcgcccagtcgttctggtacacccgcaactat
ctgccgcaggtggcctcaggcgcattacccgacgcgccgtacaacgagacccactgggac
gacgccgagttccaggatcttgtcgaccgtgctcgtcgcaccctggatgaggcggagcgc
accgaactgttgcatgaggcacagcgcatcgagtacgagcgcggcggcaacatcatctgg
ggcttcgtcaaccaggtcgacgcccaccaggtgtacgtcgcgggcctggtccccgatcgc
acgggcctgccgctgtccggttactcgttcggcgacgtctggctcggctga
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