Saccharomonospora viridis: Svir_27140
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Entry
Svir_27140 CDS
T00980
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
svi
Saccharomonospora viridis
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svi03021
]
Svir_27140
Transcription machinery [BR:
svi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Svir_27140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
HTH_Crp_2
HTH_3
MarR_2
MarR
DUF7343
Sigma70_ECF
HTH_31
HTH_IclR
HTH_Tnp_4
GerE
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ACU97696
UniProt:
C7MUM0
LinkDB
All DBs
Position
2928800..2929600
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AA seq
266 aa
AA seq
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MTPDEQSRVEKRKQAGGSAGYEDLSPLFNALAALDPDDPQRVTLREEIITRCLPLAEHIA
RRFVGRGEPRDDLVQVARLGLLNAIDRFDASRGTEFVAFAVPTIMGEVRRHFRDSSWAVR
VPRRLKELHLSLSQASSKLAQRLGRAPTPSELAAELGLSPEDVWDGLLAGNAYQSVSMDA
AYDDEGTLPLAETVGHDDVELEHVEYHESLQPLLASLPERERRVLILRFFGNMTQTQIAE
RVGISQMHVSRLLARTLEFLRSQLTE
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgacccctgacgagcaatcccgcgtagagaagcgcaagcaagcaggaggctcagcaggt
tacgaggacttgtctcctttgttcaacgcactggccgccctggatccggacgaccctcag
cgtgtgaccttgcgtgaggagatcatcactcgttgtctcccgctcgctgaacacatcgcc
cgccgcttcgtcggccgcggtgaaccacgcgatgacctggtgcaggtcgccaggctagga
ctgctcaacgccatcgaccggttcgacgcctcccgcggaaccgaattcgtcgccttcgcc
gtacccacgatcatgggcgaggtccgtcggcacttccgcgactccagttgggccgtacgg
gtacctcggcggctgaaggaactgcacctgtcactgagccaggccagcagcaaactcgcc
cagcgcctcggcagagcgccgacgccgagtgaactggccgccgaactcggcctcagcccc
gaggacgtgtgggacggactactcgcgggcaacgcctatcagtcggtctcgatggacgcc
gcctacgacgacgagggcacgctgcccctggccgagacggtcggtcacgacgacgtggaa
ctggagcacgtcgaataccacgaatcgctgcaaccactgctggcgagcctgcccgaacgg
gagcggcgggtactgatcctgaggttcttcggcaacatgacgcagacccagatcgccgaa
cgcgtggggatctcccagatgcacgtgtcccggttactcgcacgcacgctcgaattcctg
cgcagccagctcaccgagtga
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