Saccharomonospora viridis: Svir_28650
Help
Entry
Svir_28650 CDS
T00980
Name
(GenBank) oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
svi
Saccharomonospora viridis
Pathway
svi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Svir_28650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svi03019
]
Svir_28650
03009 Ribosome biogenesis [BR:
svi03009
]
Svir_28650
Messenger RNA biogenesis [BR:
svi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Svir_28650
Ribosome biogenesis [BR:
svi03009
]
Eukaryotic type
Pre-60S particles
RNases
Svir_28650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ACU97846
UniProt:
C7MW77
LinkDB
All DBs
Position
3111324..3111932
Genome browser
AA seq
202 aa
AA seq
DB search
MTDRLVWIDCEMTGLDLAKDALIEIAVLVTDAELNVLGDGVDLVIHADDEALANMPDVVR
EMHARSGLTEEVRRSTMTLEEAERRALAYIREHVPEPKTAPLAGNSIATDRGFIARDMPT
LDSYLHYRMVDVSSIKELIRRWYPRIYYAKPEKGLAHRALADIKESIGELKYYRKTAFVP
QPGPSSEEARAAAEEVARSQEG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaccgtcttgtctggatcgactgcgagatgacgggcctcgaccttgccaaggac
gccctcatcgagatcgccgtgcttgtcacggatgccgaactgaacgtgttgggcgacggt
gtcgacctcgtcatccacgccgacgacgaggcactggcgaacatgcccgacgtcgtccgc
gagatgcatgcccgctcgggtctcaccgaggaggttcgtcgttcgacgatgacgctcgag
gaggccgaacgacgtgcgctcgcctacatccgcgaacacgtcccggagcctaaaacggcg
ccgttggcggggaactcgatcgccaccgaccgcggcttcatcgcgcgggacatgccgacg
ttggattcgtacctgcactaccggatggtggacgtgtcctccatcaaggaattgatccgc
cgttggtacccccgcatctactacgcgaagccggaaaagggcctcgcgcaccgggccctg
gccgacatcaaggagtcgatcggggagctgaagtactaccggaagacggcgttcgtgccg
caacccggaccgagcagtgaagaggccagggccgctgccgaggaggtggcacgttcccag
gaggggtag
DBGET
integrated database retrieval system
