Saccharomonospora viridis: Svir_31440
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Entry
Svir_31440 CDS
T00980
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
svi
Saccharomonospora viridis
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svi03400
]
Svir_31440
DNA repair and recombination proteins [BR:
svi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Svir_31440
Archaeal homologous recombinant proteins
Svir_31440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
TsaE
NACHT
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACU98117
UniProt:
C7MYM8
LinkDB
All DBs
Position
complement(3407276..3410236)
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AA seq
986 aa
AA seq
DB search
MRLHRLEVCAFGPYAGREVVDFDALGADGLFLLHGDTGAGKTTLLDAVAFALFGAVPGAR
GQVKRLRCDLADADTPTEVVLELTVQGHHLRIVRSPEYERPKRRGEGYTTQPAKASLTWL
SPPPDGGTAEAVTRIDEVGRIVERLLGMNAQQFFQVVLLPQGEFAKFLRADTTEREKLLE
RLFGTERFAVVEQWFRDLRAERRAELEHRRSGVRDWVARLAQVAGEEIPEDPDRDWVVTL
QRRAAAEVDTARREESDARLAWEEAQARLQERRAAAERLRRVRAAHTRLAELEQRSEERV
RWSTELEAARRAATVAELVAEAEAGEEQYDREVAEEEAAARICRELGFTELDLDVAELRD
RAGALREEAGGLSGLVDQAQRQHADRQRLDVLDKLIADDKERIAIVQSKLDGLPERVGEL
LRQRELAVEAEAKLEGVRAKEAELTALLVDAEALPELERELEDARAAENTAFAAYNEAKQ
ALLDLRERRLAGMAAELAAQLAAGEPCPVCGSEQHPEPAVATDDAVSEDEERVAAEREAE
AERRRDEATAKRYEAQRRRDAAAQRVGERRVDELAEELAQVRDERDRLGEHAGKSEAFAA
SVEAAKKEEQSLMAERASCERSLSENEAERSLLAERIVERERALAEARGEFPDVSARRDH
LLALGRAVDRLADARTAVSAAGRQRDERRRSIAEAARRAGFASVDEALAAARPSERIAEL
ERLITDADAEEAAARGVLDEPDLAGVSPDDEVDVDSAEAAAQEAQKRSETAVAAVHAAER
TARELNTLAQRFEAALAELEPVEWEFAELDALTDVVNGRGQNARRMSLRSYVLAARLEEV
AVAATARLRSMSQGRYSFVHSDAAGSRGTRGGLGLDVLDDYSGMVRPAKTLSGGESFLAS
LSLALGLADVVAAETGGALLDTLFVDEGFGTLDSETLDVVMGVLDELRAGGRVVGLVSHV
EELRQRVPTRLRVRKSRSGSTLVMGG
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcacaggctggaggtttgcgcgttcggcccgtatgcgggacgcgaggtcgtc
gacttcgacgctttgggcgccgacggactgttcctgctgcacggtgacacgggtgcgggg
aagaccaccctgctcgacgcggtggcgttcgcgctgttcggagcggtgccgggagcccgt
gggcaggtgaagcggttgcggtgcgacctcgccgacgccgacacccccaccgaggtcgtg
ttggagctgaccgtgcaggggcaccacctgcggatcgttcgaagccccgagtacgagcgg
ccgaagcgacgtggtgagggttacaccacacagccggccaaggcatccctgacctggctc
agtccaccgcccgacggggggacggcggaagcggtcacccgcatcgacgaggtcggacgg
atcgtggagcggttgttgggcatgaacgcccagcagttcttccaggtcgtgctcctcccc
caaggggagttcgcgaaattcctccgcgccgacaccaccgagcgggagaaactgctggaa
cgcctgttcggtacggagcgattcgccgtggtcgagcaatggttccgcgatctgcgggcc
gagcggagagcggaactcgaacatcggcggtccggcgtgcgggactgggtggcccggttg
gcccaggtggcgggggaggagatccccgaggaccccgaccgggactgggtggtgacgctg
cagcgccgggccgccgccgaggtggacacggcgcggcgggaggagtccgacgcacgcctg
gcctgggaggaggcacaagcccgactacaggaacgcagggctgcggcggaacgacttcgg
cgggttcgagcggcgcacacccgcctcgctgaattggagcaacgctcggaggagcgcgtt
cgatggtccaccgagttggaggcggccaggcgggccgccacggtggccgagctggtggcc
gaggccgaggcgggtgaggagcagtacgaccgggaggtcgcggaagaggaggcggcggca
cggatctgccgcgagctcgggttcaccgaactcgatctcgatgtggccgagctgcgtgat
cgcgcgggtgccctacgcgaggaagccggcggactgtccggattggtcgatcaggcacaa
cggcaacacgccgaccggcagcgtcttgacgtactcgacaagctgatcgccgacgacaag
gaacgaatcgcgatcgtccagtcgaaactggacggtcttcctgagcgtgtgggcgagttg
ctgcggcaacgggaactggctgtggaggctgaggccaagctcgagggggtacgtgcgaag
gaagcggaattgacggcattgctcgtcgacgcggaggcgctgccggaactcgaacgcgag
ttggaggacgcccgcgcggccgagaacacggccttcgcggcctacaacgaagccaagcag
gccttgctcgacctgcgagagcggcgactcgcggggatggcggccgagctggcggctcag
ctcgcggcgggagaaccgtgcccggtgtgcgggtcggagcaacaccccgagcccgccgtg
gcgaccgatgacgcggtgagtgaggacgaggaacgagtcgcggccgagcgcgaagcggag
gccgagcggcgtcgggatgaggccacggcgaagcggtacgaggcgcagcggcgtcgggat
gccgccgcccaacgtgtgggggagcgtcgggtcgacgaactcgccgaggaactcgcgcaa
gtgcgtgatgaacgcgatcggctcggtgaacacgccgggaagtcggaggcgttcgcggcc
tcggtggaggcggcgaagaaagaggaacagtcccttatggccgaacgggcctcgtgcgag
cggtcgttgagcgagaacgaggccgagcggagtctgttggctgaacggatcgtggaacga
gaacgtgcccttgccgaagcgcggggggagttccctgatgtttcggccaggcgggatcat
ctgctggcactggggcgagcggtggaccggttggccgacgcgcgcaccgcggtcagcgcc
gcggggcggcagcgggacgaacgacgccggtcgatcgccgaagccgctcggcgcgccgga
ttcgcctccgtggacgaggccctggcggcagcgcgtccttcggagcggatcgccgaactg
gaacggttgatcacggatgccgatgccgaggaggccgcggcacgaggtgtgctcgacgaa
ccagacctcgccggagtgtccccggacgacgaagtggacgtcgactcggcggaagcggcg
gcacaggaagcgcagaagcgctccgaaacggcggtggcagccgtgcacgcggccgaacgg
accgcacgcgagctgaacacgttggcgcagcggttcgaggccgcgttggccgagctcgag
cccgtcgagtgggagttcgccgaactcgatgccctcaccgatgtcgtcaacggtcgaggt
cagaacgctcgccgcatgtccttgcggtcatatgtactcgcggcgaggttggaggaggtg
gccgtcgccgccaccgcgcgactgcgttcgatgagtcagggccggtactcgttcgtgcat
tccgacgcggcaggaagccggggtacccgtggcggactcgggctcgacgtgctcgacgac
tattccggcatggtccgccccgccaagacgttgtccggaggcgagtcgttcctcgcctcg
ctgtcgctggctctcggtctcgccgatgtggtggcggccgaaacgggtggtgcgctgctt
gacacgttgttcgtcgacgaggggttcgggacgttggacagcgagaccctcgacgtggtg
atgggcgtgctggacgagttgcgcgcgggtggtcgcgtggtgggcttggtatcgcatgtg
gaggaactacgacagcgggttcccacgcggctacgggtacgcaagtcgcgcagcggctca
accctggtgatgggcggttga
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