Saccharomonospora viridis: Svir_37050
Help
Entry
Svir_37050 CDS
T00980
Name
(GenBank) PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Organism
svi
Saccharomonospora viridis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_8
PAS_3
PAS_7
Diguanyl_cycl_sensor
PAS_11
Motif
Other DBs
NCBI-ProteinID:
ACU98654
UniProt:
C7MR68
LinkDB
All DBs
Position
4027646..4030405
Genome browser
AA seq
919 aa
AA seq
DB search
MEAHIHGELSTWASCDREDITDLALAASTASAWSVDLLDYDVTWSPRLAEILGVDTQNAD
AVRQRLLDLLEPLTVAARNYPVWHNFDLEQCHTTPGGETRWTRFLARAQGNAATGKVERL
VGIATDVTERFNNTRELDDLADRYRLLVELSPEGICVHQDGKLVYINPAAARFVKAASPT
QLLGRPITDFVRPAAVPELLRRISSLREPGEATEPTEVRLRTLDGGSLCIESVSVRITWR
GKPAYQVIMRDITAQKAAQAALRYQAALVRHASDAIIATTSDGMVTSWNPAAETVYGHSE
DQALGRPVSELVGVTLDPATIVAEGGVVEAEHRKADGSALTVRVSASPMDDGYVLMCADE
TARRTVERRYRTVVTALDEGVVVIDENELVGSANPAAGRILGLPVEAMIGCSPALFPLYD
ESGARVPPSEYPSALTRRTGHASHGRVLRARRPDGQWVWLSMSCRPLDSDKTPPHEVVVS
FTDITERRAIGERLEHDATHDPLTNLANRTLILQRLEEMLRRSGGRPVCVLFIDLDKFKV
INDSLGHGIGDEVLRIAGERLKNCVRQGDLVGRLGGDEFAIVASDMAHDSQIQALIGRIR
RALTEPVVVEGRRLRIDASIGVVTTHADDERSAEDLLRDADVAMYQAKTRGRGRYEFFDV
ELRERVQRQLRLEQDLRESVRGGQLWVAYQPVVDLRTQQRVAVEGLLRWDHPVHGRISPG
EFIPLAEESDLINLIGGHMLRTATRELASRRRHSGVRTQLAVNVSARQLDDGSVVSAVNE
ALRATGLPPGELCLEITESALMQEPEAAADVLTALRDLGVRLAIDDFGTGYSSLAQLWKL
PLDTLKIDRSFVAGLDGPNHPDAEAIIKGIITMAHSMGLTVVAEGTENERQIAILRELGC
DQAQGFHLGKPAPAHEVFG
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacacatccacggggagttgtccacctgggcgtcatgcgaccgggaggacatc
accgaccttgcgctcgccgccagcaccgcgagtgcgtggtcggtggatctcctcgactac
gacgttacgtggagcccccggctggccgagattctcggagtggacacccagaacgcggac
gccgtccggcaacgcctactggatttgctcgagccgttgactgtcgcagcgagaaattat
ccggtgtggcacaatttcgatcttgagcaatgtcacacgacacctggcggtgaaacccga
tggacgcgctttctcgcccgcgctcaaggcaatgccgcaacgggaaaggtcgaacggctc
gtgggaatcgccacggacgtgactgaacggttcaacaacacacgggaactggacgatctc
gccgatcgctaccgcctgctggtggaactcagtcccgagggaatctgtgtacaccaggac
ggaaaactggtgtacatcaatccggccgcggcccgattcgtcaaggccgccagccccacg
cagttattgggccgaccgatcacggatttcgtacgccccgccgcggtgccggaactgctg
cgccggatttcgtcgctgcgggaacccggtgaggccacggagcccaccgaggtgcgactg
cgcacactcgacggtggttcgctgtgcatcgagtcggtgtcggtgcgcatcacgtggcgg
ggcaaacccgcctaccaggtgatcatgcgggacatcaccgcccagaaggccgctcaagcc
gcactgcgttaccaggcggcgttggtccgccatgccagtgacgccatcatcgcgacgacg
tcggacggcatggtgacgagctggaacccggcggccgaaaccgtctacggccacagcgag
gaccaggcactgggcaggccggtgagcgaactcgtcggcgtgacactcgatccggcgacc
atcgtggccgagggtggggtcgtcgaggcggaacaccgcaaagccgacggttccgcgttg
acggtgcgcgtgtcggcctctcccatggacgacggctacgtgctgatgtgcgcggacgaa
acggcacgtcggacggtcgagcgccgctaccgcacggtggtgacggcactcgacgagggt
gtcgtggtgatcgacgaaaacgaactcgtgggatcggcgaatccggcggcgggtcgcatc
ctcggtctgcccgtcgaggccatgatcggctgctcgccggccctgttcccgctgtacgac
gagtccggcgctcgggtcccgcccagcgaatacccgtcggcgctgacgaggcgcaccggc
cacgcgtcacacggccgtgtgctgcgggcccgacgccccgatggccagtgggtgtggctg
tcgatgagctgccgaccgttggactcggacaagacgccacctcacgaggtcgtggtctcg
ttcaccgacatcaccgaacggcgggccatcggcgaacgactcgaacacgacgccacccac
gatccgctcaccaacctggcgaaccggacgttgatcctccaacggctggaggagatgctg
cggcgttctgggggacgcccggtgtgcgtgcttttcatcgacctggacaagttcaaggtc
atcaacgactcgctggggcacggcatcggcgacgaggtgctgcgtatcgcgggcgaacgg
ctgaagaactgtgtacgacagggcgacctggtcggcaggctcggaggtgacgagttcgcc
atcgtggcgtccgatatggcacacgacagccagatccaggccctgatcggccgcattcga
cgggcactgacggaacccgtcgtcgtggagggtcgtcgactgcggatcgacgccagcatc
ggcgtggtcacgacacacgcggacgacgaacgctcggccgaggacctgttgcgggacgcc
gacgtggccatgtaccaggcgaagacccggggccggggcaggtacgagttcttcgacgtc
gagttgcgggaacgcgtacaacggcaactgcgtctggagcaggacctgcgggagtccgta
cgcggcggtcaactgtgggtggcctaccagcccgtggtggatctgcgcacccagcagcgg
gtggccgtcgaggggctgctgcgctgggaccatcccgtgcacggtcggatctccccgggc
gagttcatcccgctggcggaggaaagcgacctgatcaacctgatcggcgggcacatgctg
cgcaccgcgacccgggaactggcttcccggcgcaggcacagcggtgtgcgcactcaactc
gccgtgaacgtgtcggcgcgacaactcgacgacggttcggtggtgtccgccgtgaacgag
gccctccgcgcgacgggcctaccgccgggtgagctgtgcctggagatcaccgagagcgct
ttgatgcaggagcccgaagccgcggccgatgtgctcaccgcgctacgggacctcggtgtc
agactggcgatcgacgacttcggtacggggtattcgtcgctggcgcagctgtggaagtta
ccgctggacacactgaagatcgaccgctcgttcgtggccgggctcgacgggcccaaccat
cccgacgccgaggcgatcatcaaggggatcatcacgatggctcattcgatggggctcacg
gtggtcgccgaggggacggagaacgaacgccagatcgccatcctgcgtgaactcggctgc
gaccaggcgcagggcttccacctcggcaaaccggcccccgcgcacgaggtgttcggctag
DBGET
integrated database retrieval system
