Streptomyces violascens: HWN34_06330
Help
Entry
HWN34_06330 CDS
T08842
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
svio
Streptomyces violascens
Pathway
svio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWN34_06330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svio03019
]
HWN34_06330
03016 Transfer RNA biogenesis [BR:
svio03016
]
HWN34_06330
Enzymes [BR:
svio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HWN34_06330
Messenger RNA biogenesis [BR:
svio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HWN34_06330
Transfer RNA biogenesis [BR:
svio03016
]
Prokaryotic type
tRNA degradation factors
HWN34_06330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
DUF2017
CdsD_C
Motif
Other DBs
NCBI-ProteinID:
QLA56210
LinkDB
All DBs
Position
complement(1505495..1507702)
Genome browser
AA seq
735 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKKPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFRKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALINGQWVGFPTHTELEDA
VFDMVVAGRVLDDGDVAIMMVEAEATEKTIQLVKDGAAAPTEEVVAAGLEAAKPFIKALC
KAQSELAAKAAKPTGEFPIFLDYQDDVLEALKAAVESELAQALTIGGKQEREAELDRVKA
VAAEKLLPQFEGREKEISAAYRALTKELVRRRVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGETHYVTLTDILGAEDAFGDMDFKVAGTKTFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEDEKDDASS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcaccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggttccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttccaagaagcccaaggaccag
ctggacttcttcccgctgaccgtggacgtcgaggagcggatgtacgcggccgggaagatc
cccggttccttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccggcccctgcgcccctccttccgcaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctctacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggcctgcccttctccggcccgatcggcggcacccgc
gtcgccctgatcaacggccagtgggtcggcttcccgacccacaccgagctggaggacgcc
gtcttcgacatggtcgtcgccggccgtgtgctcgacgacggtgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagacgatccagctggtcaaggacggcgccgccgccccg
accgaagaggtcgtcgccgccggtctggaagccgccaagcccttcatcaaggcgctctgc
aaggctcagtccgagctggccgccaaggccgccaagcccaccggcgagttcccgatcttc
ctggactaccaggacgacgtgctcgaggccctcaaggccgccgtcgagtccgagctggcc
caggcgctgaccatcggcggcaagcaggagcgcgaggccgagctggaccgcgtcaaggcc
gtcgccgccgagaagctgctcccgcagttcgaaggccgcgagaaggagatctccgcggcc
taccgcgcgctgaccaaggaactggtccgccgccgcgtcatcaaggacaaggtccgcatc
gacggccgtggcgtcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctcgacaccctctcgccggtgacgcgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgccctcgccgagcgcgccctggtcccggtcctgccg
acccgcgaggagttcccctacgcgatccgccaggtctccgaggccctcggctccaacggc
tccacgtcgatgggctccgtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctcaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcgacggcgag
acgcactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggtgacatggac
ttcaaggtcgccggcaccaagaccttcgtcaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgcgacgcccgcctccac
atcctcgatgtgatgaacgaggccatcgacgtcccggacgagatgtcccccaacgccccg
cggatcatcaccgtcaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggtacggtcgtcaag
accaccaccttcggtgccttcgtctccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtcctcggc
gtcggcgcgaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctcgctg
atcccggtcatcgagggcgaggacgagaaggacgacgcctcctcgtga
DBGET
integrated database retrieval system
