Streptomyces violascens: HWN34_06845
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Entry
HWN34_06845 CDS
T08842
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
svio
Streptomyces violascens
Pathway
svio03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HWN34_06845 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svio03400
]
HWN34_06845 (mutM)
Enzymes [BR:
svio01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HWN34_06845 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HWN34_06845 (mutM)
DNA repair and recombination proteins [BR:
svio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HWN34_06845 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Auto_anti-p27
DZR
Motif
Other DBs
NCBI-ProteinID:
QLA56302
LinkDB
All DBs
Position
complement(1637686..1638546)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWITGRSVASADVLHPRAVRRHLAGGEDFARRLTGLRFAAPLRRG
KYLWLPVDDAPFAVLAHLGMSGQLLVQPGEAPDEKHLRVRLRFADDLGTELRFVDQRTFG
GLSLHDTGPDGLPDVIAHIARDPLDPLFDEDAFHQALRRRRTTVKRALLDQSLISGVGNI
YADEALWRSRLHYDRPTATLTRPRSAELLTHIRAVTTAALDVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGEPCDRCGTPIRRRPWMNRSSYFCPRCQRPPRATG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagttgcccgaggtcgaagtcgtccggcgcggacttgagcggtggatcaccggg
cgctccgtcgcctccgccgacgtcctgcacccccgcgcggtccgccgccacctggccggc
ggcgaggacttcgcccgccgcctgaccggcctgcgcttcgccgccccgctcaggcgcggc
aagtacctctggctccccgtcgacgacgcgcccttcgccgtcctcgcccacctcgggatg
agcggccagctcctcgtccagcccggcgaggccccggacgagaagcacctgcgggtacgg
ctgcgcttcgccgacgacctcggcaccgagctgcgcttcgtcgaccagcgcaccttcggc
ggcctctcgctccacgacaccgggcccgacgggctgcccgacgtcatcgcccacatcgcg
cgtgaccccctcgacccgctcttcgacgaggacgccttccaccaagccctgcgccgccgc
cgcaccaccgtcaagcgcgccctgctcgaccagtccctgatcagcggcgtcggcaacatc
tacgccgacgaggccctctggcgcagccgcctccactacgaccggcccaccgccaccctc
acccgcccccgctcggcggagctgctgacccacatccgggccgtcacgaccgccgccctc
gacgtcggcggcaccagcttcgacagcctctacgtcaacgtgaacggggaatccggctac
ttcgaccgctccctggacgcctacggccgcgagggcgagccctgcgaccgctgcggcacc
ccgatccgccgccgcccctggatgaaccgctccagctacttctgcccgcgctgccagcgc
ccgccgcgggcgacgggctga
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