Streptomyces violascens: HWN34_06940
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Entry
HWN34_06940 CDS
T08842
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
svio
Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svio03032
]
HWN34_06940
03036 Chromosome and associated proteins [BR:
svio03036
]
HWN34_06940
03400 DNA repair and recombination proteins [BR:
svio03400
]
HWN34_06940
DNA replication proteins [BR:
svio03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HWN34_06940
Chromosome and associated proteins [BR:
svio03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HWN34_06940
DNA repair and recombination proteins [BR:
svio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HWN34_06940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QLA56320
LinkDB
All DBs
Position
complement(1655519..1656172)
Genome browser
AA seq
217 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQNAAEAVDAVLDAMVRAVVAGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGTKKLPKNDVAVKKAPKGSLTGGTKTTAKAA
AKKATAKKASAAKKTTATAKKATPAKKTTATAKKTSAAAKKTTATAKKATPAKSTAKKAT
AKKTAPAKKATATKAPAKKSSARKTTAKKATATARKK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggtcgtcagaacgcc
gccgaagccgtcgacgcggtgctcgacgcgatggtccgcgcggtggtggccggggagcgg
gtctccgtcaccggcttcgggtccttcgagaaggtcgaccgccccgcccggtacgcccgc
aacccgcagaccggcgagcgggtccgggtgaagaagacctccgtgccccgcttccgggcc
ggccagggcttcaaggacctggtgagcgggacgaagaagctcccgaagaacgacgtggcg
gtgaagaaggcgcccaagggcagcctcaccggcgggaccaagaccaccgcgaaggccgcc
gccaagaaggcgaccgcgaagaaggcctcggcggcgaagaagaccaccgccaccgccaag
aaggcgaccccggccaagaagaccaccgccacggcgaagaagacctccgccgccgcgaag
aagaccaccgccacggcgaagaaggccaccccggccaagtcgacggcgaagaaggccacg
gccaagaagacggccccggcgaagaaggccaccgccaccaaggccccggccaagaagtcc
tcggcccgcaagaccaccgccaagaaggccacggcgacggctcgcaagaagtga
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