KEGG   Streptomyces violascens: HWN34_06940
Entry
HWN34_06940       CDS       T08842                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
svio  Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:svio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:svio03032]
    HWN34_06940
   03036 Chromosome and associated proteins [BR:svio03036]
    HWN34_06940
   03400 DNA repair and recombination proteins [BR:svio03400]
    HWN34_06940
DNA replication proteins [BR:svio03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HWN34_06940
Chromosome and associated proteins [BR:svio03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    HWN34_06940
DNA repair and recombination proteins [BR:svio03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      HWN34_06940
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QLA56320
LinkDB
Position
complement(1655519..1656172)
AA seq 217 aa
MNKAQLVEAIADKVGGRQNAAEAVDAVLDAMVRAVVAGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGTKKLPKNDVAVKKAPKGSLTGGTKTTAKAA
AKKATAKKASAAKKTTATAKKATPAKKTTATAKKTSAAAKKTTATAKKATPAKSTAKKAT
AKKTAPAKKATATKAPAKKSSARKTTAKKATATARKK
NT seq 654 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggtcgtcagaacgcc
gccgaagccgtcgacgcggtgctcgacgcgatggtccgcgcggtggtggccggggagcgg
gtctccgtcaccggcttcgggtccttcgagaaggtcgaccgccccgcccggtacgcccgc
aacccgcagaccggcgagcgggtccgggtgaagaagacctccgtgccccgcttccgggcc
ggccagggcttcaaggacctggtgagcgggacgaagaagctcccgaagaacgacgtggcg
gtgaagaaggcgcccaagggcagcctcaccggcgggaccaagaccaccgcgaaggccgcc
gccaagaaggcgaccgcgaagaaggcctcggcggcgaagaagaccaccgccaccgccaag
aaggcgaccccggccaagaagaccaccgccacggcgaagaagacctccgccgccgcgaag
aagaccaccgccacggcgaagaaggccaccccggccaagtcgacggcgaagaaggccacg
gccaagaagacggccccggcgaagaaggccaccgccaccaaggccccggccaagaagtcc
tcggcccgcaagaccaccgccaagaaggccacggcgacggctcgcaagaagtga

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