KEGG   Streptomyces violascens: HWN34_08120
Entry
HWN34_08120       CDS       T08842                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
svio  Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:svio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svio03021]
    HWN34_08120
Transcription machinery [BR:svio03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HWN34_08120
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 Sigma70_ECF HTH_37 HTH_Crp_2 HTH_23 MarR_2 DUF7343 GerE HTH_3 Topo-V_HhH_2_2nd DUF4164
Other DBs
NCBI-ProteinID: QLA56530
LinkDB
Position
complement(1925105..1926010)
AA seq 301 aa
MTAMSAQTEAGRQVKGTQAAPAGGPAAAADLPWVEDGGKIAPQDARDLSKIFFDRLQTLE
EGTPEHQYARNTLIEMNLSLVRYAAGRFRHRGPGEMEDIVQVGTIGLIKAIDRFDLSREV
EFTTFAVPYIVGEIKRFFRDTSWAVHVPRRLQELRVDMAKAKESLAAELDREPTVKELAA
KLERTEEEVVEGLVAANGYTAGSLDVPTESGDDNRAGGSPRSLADTLGAPDPAQELVEDL
HALAPLLETLDERERRIVEMRFGQELTQSQIGAELGISQMHVSRLLSRILTRLRSGMLAE
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacggcgatgtccgcacagactgaagcgggacgacaggtcaaggggacccaggccgcc
ccggccggcggtcccgccgcggccgcggacctgccctgggtggaggacggcggcaagatc
gccccccaggacgcccgggacctgtcgaagatcttcttcgaccgtctccagacgctggag
gagggtacgcccgagcaccagtacgctcgtaacaccctcatcgagatgaacctctccctg
gtccgctacgccgccgggcgcttccggcaccgcggtccgggcgagatggaggacatcgtc
caggtcggcacgatcggtctgatcaaggcgatcgaccggttcgacctctcccgcgaggtg
gagttcaccaccttcgccgtgccgtacatcgtcggcgagatcaagcggttcttccgcgac
accagctgggccgtgcacgtcccgcgccggctccaggagctgcgcgtcgacatggccaag
gccaaggagtcgctcgccgccgagctggaccgcgagcccaccgtcaaggagctcgccgcc
aagctggagcggaccgaggaggaggtcgtcgagggcctcgttgccgccaacggctacacc
gccggttcgctcgacgtccccaccgagtccggcgacgacaaccgcgccggcggcagcccc
cgctcgctcgccgacaccctcggcgcccccgaccccgcccaggaactggtcgaggacctg
cacgccctcgccccgctcctggagaccctcgacgagcgtgaacggcgcatcgtggaaatg
cggttcggccaggagctgacccagtcgcagatcggcgccgagctcggaatctcccagatg
cacgtctcccggctgctgtcgcgcatcctcacccggctgcgttcggggatgctcgccgag
gagtga

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