Streptomyces violascens: HWN34_08495
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Entry
HWN34_08495 CDS
T08842
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
svio
Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svio03021
]
HWN34_08495
Transcription machinery [BR:
svio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWN34_08495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
MarR_2
HTH_10
HTH_3
HTH_AsnC-type
DUF7343
Sigma70_ECF
NirdL-like_HTH
MarR
IF2_N
HTH_Crp_2
HTH_5
GerE
HTH_AraC
UBA_2
Motif
Other DBs
NCBI-ProteinID:
QLA56600
LinkDB
All DBs
Position
2008801..2009664
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AA seq
287 aa
AA seq
DB search
MTEDKHQDEKPDGQDEQPEHQKDQAPPAGAPVDRPDPHDRSGARALFIELRTLPAGGPEY
AELRNRLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYAT
PTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTSATAELSQRHGRSPTVHELAEKLGISEE
EVLEGLESANAYSTLSLDVPDTDDESPAVADTLGSEDEALEGVEYRESLKPLLEDLPPRE
KRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggacaagcaccaggacgagaagccggacgggcaggacgagcagccggagcac
cagaaggaccaggcgcccccggcgggcgcccccgtggaccgccccgacccgcacgaccgc
agcggcgcccgcgccctcttcatcgagttgcgcaccctgccggccggcggccccgagtac
gcggagctgcgcaaccggctggtccggatgcacctgccgctggtcgagcacctggcccgc
cgcttccgcaaccgcggcgagccgctcgacgacctgacccaggtggcgacgatcggcctg
atcaagtcggtcgaccgcttcgacccggagcgcggcgtggagttctccacctacgccacg
ccgacggtggtcggcgagatcaagcggcacttccgcgacaaggggtgggcggtgcgggtg
ccgcgccgcctccaggagctgcggctctcactcacctcggccaccgccgagctctcccag
cggcacgggcgctcgccgaccgtgcacgaactggccgagaagctgggcatctccgaggag
gaggtgctggagggcctggagtcggccaacgcctactcgacgctctccctggacgtcccc
gacaccgacgacgagtccccggccgtcgccgacacgctcggctcggaggacgaggcactg
gagggcgtggagtaccgggagtcgctcaagccgctgctggaggatctcccgccgcgcgag
aagcgcatcctgctgctccgcttcttcggcaacatgacccagtcgcagatcgcccaggag
gtcggcatctcgcagatgcacgtctcccggctgctggccaggacgctcgcgcaactgcgc
gagaagctcctggtcgaggagtag
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