Streptomyces violascens: HWN34_09505
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Entry
HWN34_09505 CDS
T08842
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
svio
Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svio03400
]
HWN34_09505
DNA repair and recombination proteins [BR:
svio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HWN34_09505
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QLA56780
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All DBs
Position
2241239..2241703
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AA seq
154 aa
AA seq
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MTAQPPSSAWEPPAGSWASSAGRRRNMQAIRSRDTSPEMAIRRLVHAQGLRYRVSSRPLP
ALRRTADLVFRPVRVAVFIDGCYWHGCPEHYVPPRTNSGYWSDKVLRNVTRDRDTDHALR
EAGWTVLRFWEHEPPGACAHQIADTVQRLRQRDE
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcgcagccgccctcttccgcgtgggaaccacctgcggggtcctgggcctcgtcg
gccggcaggcgccggaacatgcaggccatccgcagccgtgacacctcccccgagatggcc
atccggcgactcgtgcacgcccagggcctgcgctaccgcgtctccagccgccccctcccg
gcgctgcggcgcaccgccgacctggtcttccgcccggtgagggtcgccgtgttcatcgac
ggctgctactggcacgggtgcccggagcactacgtgcccccgaggaccaacagcggctac
tggtcggacaaggtgctccgcaacgtcaccagagaccgggacaccgaccacgcgctgcgc
gaagcgggctggaccgtgctccgcttctgggaacacgagccgcccggcgcatgcgcccac
cagatcgcggacaccgtccagcggctacggcagcgggacgagtag
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