Streptomyces violascens: HWN34_14860
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Entry
HWN34_14860 CDS
T08842
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
svio
Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svio03021
]
HWN34_14860
Transcription machinery [BR:
svio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWN34_14860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
NirdL-like_HTH
HTH_Crp_2
HTH_17
MarR
HTH_3
DUF134
DUF7343
HTH_5
HTH_37
DUF4423
Motif
Other DBs
NCBI-ProteinID:
QLA60726
LinkDB
All DBs
Position
3423587..3424471
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AA seq
294 aa
AA seq
DB search
MPGAGAAPGAETVPGSGTGPGRTQRSAPFRPGRASDPAARKRGADTRALTQLLFSQLKEV
EPGTAEHARVRSALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGV
QFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVTSATEDLTTAHGRSPTTAEIAE
RLRISEDEVLACIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALDGVEHRDLVRHLL
VQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIDP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggcgccggagccgccccgggcgccgaaaccgtgcccggttccgggacgggcccg
gggcggacgcagcgcagcgcgcccttccggccggggcgcgcctccgacccggccgcgcgc
aaacgcggggcggacacccgcgcgctcacccagctcctcttctcccagctcaaggaggtg
gagccgggcaccgccgagcacgcccgggtccgcagcgccctcatcgaggccaacctgccc
ctggtccggtacgccgccgcccgcttccgcagccggaacgagccgatggaggacgtggtc
caggtcggcaccatcggcctgatcaacgccatcgaccggttcgacccggaccggggcgtg
cagttcccgaccttcgcgatgccgacggtggtcggcgagatcaaacggtacttccgggac
aacgtccgcaccgtccacgtaccgcgccggctccacgagctgtgggtgcaggtcaccagc
gccaccgaggacctcaccaccgcgcacggccgctccccgaccaccgccgagatcgccgag
cggctgcggatcagcgaggacgaggtgctcgcctgcatcgaggccggccgctcgtaccac
gcgacctcgctggaggcggcccaggagggcgacgggctcccgggcctgctcgaccggctc
ggctacgaggacccggcgctcgacggcgtggaacaccgcgacctcgtccgccacctgctg
gtccagctccccgagcgcgagcagcgcatcctcctgctgcgctactacagcaatctgacg
cagtcccagatcagcgcggagctgggcgtctcgcagatgcacgtctcgcgtctgctggcc
cggagcttcgcgcggctgagatccgcaaacagaatcgatccctaa
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