Streptomyces violascens: HWN34_14865
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Entry
HWN34_14865 CDS
T08842
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
svio
Streptomyces violascens
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svio03021
]
HWN34_14865
Transcription machinery [BR:
svio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWN34_14865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QLA57721
LinkDB
All DBs
Position
3424703..3425725
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AA seq
340 aa
AA seq
DB search
MSAEQGSSKVLTLSKSAPGVLDRAEFPHGLPPETTRQEDALRATVPAQAAHPAGPPGAAD
TVTPLPEADEAVPADLPEPSGALDTRTLSRSLFLRLRELAAEDSGGQDSPERAYVRDTLI
ELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVIGEIK
RFFRDTSWSVRVPRRLQELRLALTKTSDELAQKLDRSPTVPELAHALGVSEEDVVDGLAV
GNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERRIIML
RFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLIAD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgctcagcaagagtgcccccggtgtg
ctcgaccgtgcggaattcccgcatggcctgccgccggagacgacccgtcaggaagacgcg
ctccgggccacggttccggcgcaggccgcccacccggccgggccccccggcgccgcggac
acggtcacgccgctcccggaggccgacgaggcggtcccggccgacctccccgagccctcg
ggcgcgctcgacacgcgcaccctctcccgctccctcttcctgcgcctgcgcgagctggcg
gcggaggactccggcggccaggacagccccgagcgggcctacgtccgcgacaccctcatc
gaactgaacctccccctcgtccggtacgcggcggcccgcttccgcagccggaacgagccg
atggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgaccggttcgac
tgcgagcgcggggtggagttcccgaccttcgcgatgccgacggtgatcggcgagatcaag
cggttcttccgggacaccagctggtcggtgcgggtcccgcgccgcctccaggagctgcgg
ctcgcgctcaccaagaccagcgacgagctggcccagaagctcgaccgctccccgaccgtg
cccgagctggcgcacgcgctcggcgtctcggaggaggacgtcgtcgacggcctcgccgtg
ggcaacgcctacaccgcctcctcgctcgactccccggcccccgaggacgacggcggcgag
ggctccctcgcggaccgcctggggtacgaggacacggcgctggagggcgtggagtaccgc
gagtcgctcaagcccctgctggccaagctgccgccgcgcgagcgccggatcatcatgctc
cgcttcttcgccaacatgacccagtcgcagatcggcgaggaggtcggcatctcccagatg
cacgtctcgcgcctcctcacccgcaccctggcccagctccgcgagggcctgatcgcggac
tga
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