Streptomyces violascens: HWN34_14940
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Entry
HWN34_14940 CDS
T08842
Name
(GenBank) PAS domain-containing protein
Organism
svio
Streptomyces violascens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Diguanyl_cycl_sensor
Response_reg
HisKA
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QLA57733
LinkDB
All DBs
Position
3438375..3443609
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AA seq
1744 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALVLVNCNGTVVNANTIALERLEAPGTALVGRGLLDLLP
EFDSRLIPGSMRRPDTIDEQGRTRPTRMTARRTDGSEFPVEVTSASLAEGREPGWGAPSQ
FGTGAADQRYTGDELLMIVVRDLSGTVDTEAELARSQRQTEMILRAAAEGVVGTDTDGRV
VLVNPAAAQILGFRAGDLGGREFHTLVLHSRADGEPFPYAESPLADTLRSGRKHRVRGQV
LWAKDGSPVPVDLTTAPVRDGDQLVGAVVTFTDRRAHEALVAEHAEEQAAAEKRYEELAE
REQRRYEELETSSAEKYETLDRTSRERYEELERTSTAKYQELERTSRERYETLERESAER
YEALAEREKERYAALGEREKDRYEALAARHDQLVAVLSESLRGPLDHLRSELGSLAADPA
GQLWPEANQILHHLSAGYARMTTLVDNVLGYQRLDAGQDSLDRKKVLLDEVIAAGVEGAV
ELIGPGRAQFAVHAPSIEAEIDPHRFATALAHLIADVAGIDATGNARQTPQAMAGGYIDS
TVVVAAALRGNAVRIEVRGPFAGGDPVHEPLVRGIVRAHGGVLQTHAMAGMSGSAYVLDI
PLGEGAGAVQAPPQAELPAGGTTAQAPEGAGPDTESDRPHGRRRRRAAPRSSVDSFLGTS
ADGTPAAPEPAPAAAPTGRRRGRRAADETPVEAVLAGQDGGETPAAGSAVALPAPTGAAE
GGTGRRRRRAAAPQDGNAPTSEGAVTTAAEHAAGTAASASALGGTVPPQGVPPAGLRAAQ
PALPPAGSTGPGAAVVIAPGVRPGLSAAVPRPAQAPDDQQGRAAQRPAPSAIPALPPAGA
PAPARPTPPGMPDTPAAPAAPAPAVGTPGETVQALPSGQPHAAPAPGQVAPAPVPPQFGQ
PAGPTAASTGTAVPTQPGVQNPATAPAPAPVPPVTAAPGVPVPPAPAAPGTAASPATPPP
AAAVPAAPTEAQVPAANPAGPQAPVPPGFPAGTTQPVQPGQPAPQPPAAGPLTPPFAVGQ
ALQAPVPGSPVPPAAPATEQAAPAPGAAPAQDPTAVRPQHPLAPPQLPAASQGGPASSMP
LPPATGTPTAPGAPGTPPAPVGQQTPPAGLPAQQPVAQPGVPGQQPAGSPVQVPPGAAYP
AAPVAQQPQPAQALPGQQGAGPRRARRALADGPGQMPGEAAETGPGLALPSAEDAHGPAG
HPALDHTPPQAHPLPTASAPLPEATPAGGTPVSPPAADGWAVPTAATGSVPLPEAAPPVE
GQEPAAGPQTGNVPGLQAGPEAVSRETSPVAPTGGEAPVSRETSDEAPVAPVSRETSAED
PAEPVSRETSAATAAPAPQPQRLAQPLPAESAEQQAASAQSRAFSVRTLGQGVPFAAPGR
PAEPQRRPLNNPAQPPQNPPPPAPATAGRRRKLGTPPAAEEAATPPAPQQAAPQAPPQQA
TPAASTPVPAPAPAPEADGYPAQGRSYAIGAPDEGAEGPEPLDGPNGAVEVANQPQPQPQ
DAELPPEPLDNPRRLLVWPAPDVSTQQALSDRGYRPVIVHSREEVDAQIAAFPAALFVDP
LTGPITRTALQSLRQAAVAAEVPVLVTAGLGQATREAAYGADPAVLLKALAARDSEQHPS
RVLLIEEREEIALALTAALERRGMQVARATTDTDAVNLATQMHPNLVVMDLMQVRRRRAG
VVDWLRANGRLNHTPLVVYTAAGIDPSELPRLASGETVLFLAERSTTDDVQARIVDLLAK
IGTN
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcacgaggcgctgctcgcctcgcagcaatactcgacgcgcttccc
gacgccctggtgctcgtcaactgcaacggcacggtcgtcaacgcgaacaccatcgccctg
gagcgcctggaggcgcccggtacggcgctggtcgggcgcggactgctcgatctgctcccg
gagttcgactcgcggctgatccccggatcgatgcgccgcccggacaccatcgacgagcag
ggccggaccaggccgacgcggatgacggcccggcggaccgacggttccgagttccccgtc
gaggtgaccagcgccagcctcgccgaggggcgggagcccggctggggtgccccctcgcag
ttcgggaccggggcggcggaccagcggtacaccggcgacgaactgctgatgatcgtggtc
cgggacctctccgggaccgtcgacaccgaggcggagctggcccgttcgcagcggcagacc
gagatgatcctgcgcgcggcggccgagggcgtcgtcggcaccgacaccgacgggcgcgtc
gtcctggtcaacccggcggcggcgcagatcctcggcttccgcgccggggacctgggcggc
cgggagttccacacgctggtcctgcactcgcgggccgacggagaacccttcccgtacgcc
gaatcgccgctcgccgacacgttgcgctccgggcgcaagcaccgggtgcgggggcaggtg
ctgtgggccaaggacggctcgccggtgccggtcgacctcaccaccgcgcccgtgcgcgac
ggggaccagctggtgggcgccgtcgtcaccttcaccgaccggcgcgcccacgaggcgctc
gtcgccgagcacgccgaggagcaggccgcagccgagaagcgctacgaggagctggccgag
cgcgaacagcggcggtacgaggagctggagacctcctcggccgagaagtacgagacgctc
gaccgcacctcacgcgagcggtacgaggagctggaacgcacctccaccgcgaagtaccag
gagctggagcgcacctcccgcgagcggtacgagacgctggagcgtgagtccgccgagcgg
tacgaggcgctggcggagcgggagaaggagcggtacgcggctctcggtgagcgggagaag
gaccgctacgaggcgctcgcagcccgccacgaccagctggtcgcggtgctctccgagtcg
ctgcgcggccccctcgaccacctgcggagcgaactgggttcgctcgccgccgacccggcg
ggccagctctggcccgaggccaaccagatcctgcaccacctctccgccggctacgcgcgg
atgacgaccctcgtcgacaacgtcctcggctaccagcggctcgacgccggtcaggacagc
ctggaccgcaagaaggtgctgctcgacgaggtcatcgcggccggtgtcgagggcgccgtc
gagctgatcggcccgggccgggcccagttcgccgtgcacgccccgtccatcgaggcggag
atcgacccgcaccgcttcgccacagcgctggcccacctcatcgccgacgtggccggcatc
gacgccaccggcaacgcccggcagaccccgcaggccatggccggcgggtacatcgactcc
acggtcgtcgtcgcggcggccctgcgcggcaacgcggtacgcatcgaggtgcgcggcccg
ttcgcgggcggcgacccggtgcacgagccgctggtacgcggcatcgtccgggcccacggc
ggcgtcctgcagacccacgccatggccggcatgagcggcagcgcctacgtcctggacatc
ccgctcggcgagggcgccggggcggtccaggcgccgccacaggccgaactgcccgccggc
gggacaaccgcgcaggcacccgagggcgccggcccggacaccgagtccgaccggccgcac
gggcggcggcgccggcgtgccgcaccgcgctcctccgtcgactccttcctgggcacctcc
gccgacggcaccccggccgcgcctgaacccgcccccgcggccgcccccaccgggcgccgt
cgtggccgccgggcggccgacgagacgccggtcgaggccgtactggccgggcaggacggc
ggggagaccccggccgccggcagcgcggtcgccctgcccgcacccaccggcgccgccgag
ggcgggaccggacgcaggcgccggcgcgccgccgcgccccaggacgggaacgccccgacc
tccgagggcgcggtgaccaccgcggcggagcacgccgccggtaccgcggcctccgccagc
gccctgggcggaacggtgcctccgcagggggtgcccccggccgggctccgcgccgcgcag
cccgcgctgccgcccgccggttccaccggcccgggcgcggccgtcgtcatcgccccgggg
gtccgccccgggctcagcgccgccgtgccgcgcccggcccaggcccccgacgaccagcag
ggccgcgccgcacagcgccccgcgccctccgccattcccgcgctgccaccggccggagcc
cccgctcccgcccggccgacaccgcccggcatgcccgacaccccggcggcacccgccgca
ccggcccccgcggtgggcaccccgggcgagacggtccaggccctgccctccgggcagccg
catgccgcgcccgctcccggccaggtggcccccgcccccgtgcccccgcagttcgggcag
ccggccggcccgaccgccgcctccaccggcaccgcggtccccacgcagccgggcgtccag
aacccggccacggctcccgccccggctcccgtcccgccggtcacggccgcccccggtgtg
ccggtaccgcccgccccggcggcccccggcaccgccgcgagccccgcgactccgccgccc
gccgccgctgttccggccgcgcccaccgaggcgcaggtcccggcggcgaaccccgccggc
ccgcaggctccggtcccgcccggcttcccggcgggtacgacccagccggtccagcccggg
cagcccgcgcctcagccccccgctgccggcccgttgacgccgccgttcgccgtcggccag
gcgctccaggctcccgtgccgggctcgccagtgccgccggccgcgcccgcgacggagcag
gcggcaccggctcccggtgctgcccccgctcaggacccgacggccgtgcgcccgcagcac
ccgctcgccccgccgcagctccccgccgcgtcgcagggcggccccgcctcttccatgccg
ctcccgcccgcgacgggcacgcccacggcccccggggccccgggcaccccgcccgcaccc
gtggggcagcagaccccgcccgccgggctcccggcccagcagcccgtggcacagccgggc
gtgcccggtcagcagcctgccggttcgccggtccaggttccgcccggcgccgcgtacccg
gccgctcccgtggctcagcagccgcagcccgcgcaggcgttgcccgggcagcagggtgcg
gggccccggcgggctcggcgtgccctcgccgacgggcccgggcagatgccgggcgaggcg
gcggagaccgggcccggcctggccctcccctcggcggaggacgcacacgggccggccggt
caccccgcgctcgaccacaccccgccgcaggcgcatccgctgccgaccgcttcggctccg
ctgccggaggcgacgccggccggggggacgcccgtctccccgcccgccgccgacggctgg
gcggtgcccacggcggcgacgggttccgtccccctgcccgaggcggctccccccgtcgag
gggcaggagccggccgccgggccgcagacgggaaacgtgcccggactccaggcagggcct
gaggcggtttcacgtgaaacatcacccgtcgcccccacgggcggcgaggcgcccgtttca
cgtgaaacatccgacgaggctccggtcgcccctgtttcacgtgaaacatcggccgaggac
ccggctgagcctgtttcacgtgaaacatccgccgccactgcggctccggcaccacagccg
cagcgccttgcccagccgctcccggccgagtccgccgagcagcaggccgcctccgcgcag
agccgggcgttcagcgtgcgcaccctcggccagggagtgcccttcgcggcccccggccgg
ccggccgagccgcagcgccgtccgctgaacaacccggcccagccgccgcagaacccgccg
cccccggccccggccacggccggccgccggcggaagctggggacgcccccggcggcggag
gaggcggcgacgcctcccgctccgcagcaggccgctccgcaggcgccgccgcagcaggcg
actccggccgccagcacgcccgtaccggcgcccgcgcccgcgcccgaggccgacggctat
cccgctcagggccggtcatacgcgataggcgcgcccgacgagggggccgaggggccggag
ccgctggacgggcccaacggcgccgtcgaggtggccaaccagccgcagcctcagccgcag
gacgccgagctgccgcccgagccgctggacaacccccggcgtctgctcgtctggccggca
cccgacgtctccacccagcaggcgctcagcgaccgtggataccgtccggtgatcgtgcac
tcccgggaggaggtggacgcgcagatcgccgccttcccggccgcgctcttcgtcgacccg
ctgaccgggccgatcacccggaccgctctccagtcgctgcgccaggccgcggtggccgcc
gaggtcccggtcctggtgaccgcagggctggggcaggcgacgcgggaggcggcgtacggg
gccgatccggcggtgctcctcaaggcgctggccgcccgcgacagtgagcagcacccctcg
cgggtcctgctcatcgaggagcgcgaggagatcgcgctggcgctgacggcggcgctggag
cgccggggcatgcaggtcgcccgggccaccaccgacaccgacgcggtcaacctggccacc
cagatgcaccccaacctcgtggtgatggacctgatgcaggtccgccgccgccgggccggg
gtggtggactggctgcgggccaacgggcggctcaaccacaccccgctggtcgtctacacg
gccgccggtatcgacccgtcggagctgccgaggctcgcctccggggagaccgtcctcttt
ctggccgagcggtcgaccaccgacgacgtccaggcccggatcgtcgacctgctggcgaag
ataggcaccaactga
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