Streptomyces violascens: HWN34_19250
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Entry
HWN34_19250 CDS
T08842
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
svio
Streptomyces violascens
Pathway
svio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWN34_19250 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svio03019
]
HWN34_19250 (groL)
03110 Chaperones and folding catalysts [BR:
svio03110
]
HWN34_19250 (groL)
03029 Mitochondrial biogenesis [BR:
svio03029
]
HWN34_19250 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svio04147
]
HWN34_19250 (groL)
Enzymes [BR:
svio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HWN34_19250 (groL)
Messenger RNA biogenesis [BR:
svio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HWN34_19250 (groL)
Chaperones and folding catalysts [BR:
svio03110
]
Heat shock proteins
HSP60 / Chaperonin
HWN34_19250 (groL)
Mitochondrial biogenesis [BR:
svio03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HWN34_19250 (groL)
Exosome [BR:
svio04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HWN34_19250 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HWN34_19250 (groL)
Exosomal proteins of breast cancer cells
HWN34_19250 (groL)
Exosomal proteins of colorectal cancer cells
HWN34_19250 (groL)
Exosomal proteins of bladder cancer cells
HWN34_19250 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QLA58532
LinkDB
All DBs
Position
4403239..4404861
Genome browser
AA seq
540 aa
AA seq
DB search
MAKILKFDEDARRALERGVNQLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
CDDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVAAVSAELLDTARPIDDKSDIAAVAALSAQDKQVGELIAEAMDKVGKDGVITVEESNT
FGVDLDFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILIHQGKIGSIQDLLPLLEKVIQ
AGGSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDMATLTGATV
IAEEVGLKLDQAGLDVLGTARRVTVTKDDTTIVDGGGNAEDVQGRVAQIKAEIESTDSDW
DREKLQERLAKLAGGVCVIRVGAATEVELKERKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLDDNLGRTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITTKVAELDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEEEPEAGHGHGHSH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtgaac
cagctggccgacaccgtcaaggtgaccatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgccccgaccatcaccaacgacggcgtcaccatcgcccgtgaggtcgag
tgcgacgacccgtacgagaacctcggcgcccagctcgtcaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgcgaccgtgctggcccaggcgctggtccgc
gagggcctgcgcaacgtcgccgccggcgcctccccggccgccctgaagaagggcatcgac
gccgccgtcgccgccgtctccgccgagctgctcgacaccgcgcgcccgatcgacgacaag
tccgacatcgccgccgtcgccgcgctctccgcgcaggacaagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtgtcgacctggacttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtgaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
caccagggcaagatcggttcgatccaggacctgctgccgctgctggagaaggtcatccag
gcgggtggctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtggtcaacaagatccgcggcacgttcaacgccgtcgccgtcaaggcgcccggc
ttcggtgaccgccgcaaggcgatgctcggcgacatggccaccctcaccggtgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctgggcaccgcc
cgccgcgtcaccgtcaccaaggacgacacgaccatcgtggacggcggcggcaacgccgag
gacgtccagggccgcgtcgcccagatcaaggccgagatcgagtcgaccgactcggactgg
gaccgcgagaagctccaggagcgcctcgccaagctggccggcggcgtctgcgtgatccgc
gtcggcgcggccaccgaggtcgagctgaaggagcgcaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctggtc
cacgccgtcaaggtcctggacgacaacctcggccgcaccggcgacgaggccaccggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcaccaccaaggtggcggagctcgacaagggccagggcttcaacgcg
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgcggcctccatcgcctccctgctcctgacgaccgagaccctg
gtcgtcgagaagccggccgaggaggagcccgaggccggtcacggccacgggcacagccac
tga
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