Streptomyces violascens: HWN34_21355
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Entry
HWN34_21355 CDS
T08842
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
svio
Streptomyces violascens
Pathway
svio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HWN34_21355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svio03400
]
HWN34_21355
Enzymes [BR:
svio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HWN34_21355
DNA repair and recombination proteins [BR:
svio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HWN34_21355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
TraI_hel_assoc_N
Helicase_RecD
AAA_16
PIF1
NPHP3_N
HTH_IclR
UvrD_C
DEAD
nSTAND3
AAA
P-loop_TraG
AAA_28
TrwB_AAD_bind
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QLA58919
LinkDB
All DBs
Position
4867796..4870054
Genome browser
AA seq
752 aa
AA seq
DB search
MSPAVPPQDQPRLAVLEAVLERITYANEENGYTVARVDTGRGGGELLTVVGALLGAQPGE
ALRMEGRWGSHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPRIADRITEHFGV
DTLDVIETDAKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVTTSIAVRIYKK
YGDASISVVRNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPDRVKAGLQYALYQSSDQG
HVYLPEDRLIADAVKLLQVDTGLVIDCLGELAADEEGVVREKVPGPDGEPVTAVYLVPFH
RAEVSLAAQLLRLLRAPDDRMPAFRDVDWEKALGWLARRTGTELAPEQRDAVRLALTEKA
AVLTGGPGCGKSFTVRSVVELARAKGAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELR
PGGDAAYDRERPLDADLVVVDEASMLDVLLANKLVKAVAPGAHLLFVGDVDQLPSVGAGE
VLRDLLADGGPIPSVRLTRIFRQAQRSGVVTNAHRINAGTPPLTQGLDDFFLFVEDDTEE
VGRLTVDVAARRVPARFGLDPRRDIQVLAPMHRGPAGAGALNGLLQQAITPARPDLPEKR
FGGRVFRVGDKVTQIRNNYEKGLNGVFNGTVGVVTALNAEEQRLTVLTDEDEEVPYDFDE
LDELAHAYAVTIHRSQGSEYPAVVVPVTTSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAI
GQAVRTVSAGRRCTALGHRLLSGTPGRPVGQK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagccgtacccccgcaggaccagccccgtctcgccgtcctcgaagccgtcctg
gagcggatcacctacgccaacgaggagaacgggtacaccgtggcccgggtggacaccggg
cggggtggcggggaactgctcaccgtggtcggggcgctgctcggggcgcagccgggggag
gcgttgcggatggaggggcggtgggggtcgcatccgcagtacggcaagcagttcacggtg
gagaactacacgacggtgctgcccgccacagtgcagggcatccgccgctacctcgggtcc
gggctgatcaagggcatcgggccgcggatcgccgaccggatcaccgagcacttcggggtc
gacaccctcgacgtcatcgagaccgacgccaagcggctggtggaggtgccggggctcggg
cccaagcggacgaagatgatcgccgccgcctgggaggagcagaaggcgatcaaggaggtg
atggtcttcctccagggggtcggcgtcaccacctccatcgccgtgcgcatctacaagaag
tacggtgacgcctccatctccgtcgtgcgcaaccagccctaccggctggccgccgacgtc
tggggcatcggcttcctcaccgccgaccggatcgcccaggccgtcggcatcccgcacgac
agcccggaccgcgtcaaggccggactccagtacgccctctaccagtccagcgaccagggc
cacgtctacctccccgaggaccggctcatcgcggacgccgtcaagctgctccaggtcgac
accggcctggtcatcgactgcctcggggaactcgccgccgacgaggagggcgtggtccgc
gagaaggtgcccggccccgacggcgagcccgtcaccgccgtctacctggtccccttccac
cgggccgaagtctccctcgccgcccagctgttgcggctgctgcgcgccccggacgaccgg
atgcccgccttccgggacgtcgactgggagaaggcgctgggctggctggcccgccgcacc
ggcaccgaactcgcccccgagcagcgggacgcggtccggctcgccctcaccgagaaggcg
gccgtgctcaccggcgggcccggctgcggcaagtcgttcaccgtgcggtcggtggtggaa
ctggcccgggccaagggcgccaaggtggtcctcgccgccccgaccgggcgggccgcgaag
cgcctcgccgagctgaccggagccgaagcctccacggtccaccggctgctggagctacgt
cccggcggcgatgccgcgtacgaccgggagcggccgctcgacgccgacctcgtggtggtc
gacgaggcgtccatgctcgacgtgctgctcgccaacaagctggtcaaggcggtcgcgccc
ggcgcccacctgctcttcgtcggcgacgtcgaccagctgcccagcgtcggcgccggcgag
gtcctgcgcgacctgctcgccgacggcggaccgatcccctccgtcaggctgaccaggatc
ttccgccaggcccagcgctccggggtcgtcaccaacgcccaccgcatcaacgcgggcacg
ccgccgctcacccagggcctcgacgacttcttcctcttcgtggaggacgacaccgaggag
gtcggccgcctcaccgtcgacgtcgccgcccgccgcgtcccggcccgcttcggtctcgac
ccgcgccgcgacatccaggtcctcgcccccatgcaccgcggcccggccggcgcgggcgcc
ctgaacggcctcctccagcaggccatcaccccggcccggcccgacctcccggagaagcgg
ttcggcggccgggtcttccgcgtcggggacaaagtgacccagatccgtaacaattacgag
aaagggctcaacggcgtcttcaacggaaccgtcggcgtcgtcaccgccctcaacgccgag
gagcagcggctgaccgtgctcaccgacgaggacgaggaggtcccgtacgacttcgacgag
ctggacgagctggcgcacgcctacgccgtgaccatccaccgctcgcagggcagcgagtac
cccgcggtggtggtgccggtgaccaccagcgcctggatgatgctgcagcggaacctgctc
tacaccgccgtcacccgggcgaagaagctggtcgtcctggtcgggtcgcggaaggcgatc
ggccaggcggtgcgtaccgtctccgcaggcaggaggtgcaccgcgctcggccatcggctg
ctctcggggacgcccggccggccggtcggccagaaatga
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