Streptomyces violascens: HWN34_24325
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Entry
HWN34_24325 CDS
T08842
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
svio
Streptomyces violascens
Pathway
svio03030
DNA replication
svio03430
Mismatch repair
svio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWN34_24325 (dnaE)
03430 Mismatch repair
HWN34_24325 (dnaE)
03440 Homologous recombination
HWN34_24325 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svio03032
]
HWN34_24325 (dnaE)
03400 DNA repair and recombination proteins [BR:
svio03400
]
HWN34_24325 (dnaE)
Enzymes [BR:
svio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HWN34_24325 (dnaE)
DNA replication proteins [BR:
svio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HWN34_24325 (dnaE)
DNA repair and recombination proteins [BR:
svio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HWN34_24325 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QLA59455
LinkDB
All DBs
Position
5572034..5575582
Genome browser
AA seq
1182 aa
AA seq
DB search
MSATSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHSA
EKAGVTPIIGIEAYVAPESRRTKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNL
FRLSSDAYSEGWLQKWPRMDKESISQWSEGLIASTGCPSGEVQTRLRLGQEEEALRAAAE
YQEIFGKDRYFLELMDHGIEIERRVRQGLLDIGKKLGIPPLVTNDSHYTYSHESVAHDAL
LCIQTGKNLSDPDRFRFDGTGYYLKSTEEMYAIDSSDAWQEGCRNTLLVAEQIDTTGMFE
KRDLMPKFDIPDGFTEVTWFQEEVRRGMARRFPAGVPEDRQRQAEYEMDVIIQMGFPGYF
LVVADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERVSMPD
VDIDFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTK
AMPADVLGKGIDLDGITNPKHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVH
AAGVIMSSEPIVDHAPLWTRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDARKM
VEANKGIDLDLLALPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVS
ALYRPGPMGMNSHTNYALRKNGQQEITPIHPELEEPLKEILGLTYGLIVYQEQVQKAAQI
IAGYSLGEADILRRVMGKKKPEELAKNFVLFQEGAKKKGFSDEAIQALWDVLVPFAGYAF
NKAHSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMKIKVLPPDV
NESVHNFAAQSDDVILFGLEAVRNVGTNVVESIIRARKAKGKFSSFPDYLDKIEAQACNK
RTTESLIKAGAFDALGHTRKGLTAHYEPMIDNVVAVKRKEAEGQFDLFGGMGDDNADEPG
FGLDIEFTDEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDFGDG
AVVTVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVK
GRLDKREDIPRLVAMELQVPDLSNAGTNAPVIITIPAVKVTPPMVSRLGEVLDSHRGNSE
VRIKLQGPRKTTVLRLDRHRVQPDPSLFGDLKVLLGASCLAG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgccacgtccaagccgcccttcacgcacctgcacgtccacacgcagtactccctg
ctggacggtgccgcgcggctcaaggacatgttcgacgcgtgcaacgagatgggcatgacc
cacatcgccatgtcggaccacggcaacctccacggcgcgtacgacttcttccacagcgcc
gagaaggcgggggtcacgccgatcatcggcatcgaggcgtacgtggccccggagtcgcgg
cggaccaagcggaagatccagtggggccagccgcaccagaagcgcgacgacgtctcgggc
tccggcggttacacccacaagacgatctgggcggccaactccaccggcctgcacaacctc
ttccggctctcctccgacgcgtactccgagggctggctccagaagtggccccggatggac
aaggagtcgatctcgcagtggtcggaggggctgatcgcctccaccggctgcccctccggc
gaggtgcagacccggctgcggctgggccaggaggaggaggcgctgcgggccgccgccgag
taccaggagatcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgag
atcgagcgccgcgtccgccagggcctgctggacatcggcaagaagctcggcatccccccg
ctggtcaccaacgactcgcactacacctactcccacgagtcggtcgcccacgacgccctg
ctctgcatccagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcacg
ggctactacctgaagtcgacggaggagatgtacgccatcgactcctccgacgcctggcag
gaggggtgccgcaacacgctgctggtcgccgagcagatcgacaccaccggcatgttcgag
aagcgcgacctgatgccgaagttcgacatcccggacggcttcaccgaggtgacctggttc
caggaggaggtccgccgcggcatggcgcgccgcttcccggccggcgtccccgaggaccgc
cagcggcaggccgagtacgagatggacgtcatcatccagatggggttcccggggtacttc
ctcgtcgtcgccgacttcatcatgtgggcgaagaacaacggcatcgcggtcggccccggc
cgaggctccgcggccggttcgatcgtcgcgtacgccatgggcatcaccgacctcgacccg
atcgagcacggcctgatcttcgagcgcttcctcaacccggagcgcgtctccatgcccgac
gtcgacatcgacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtcacggagaag
tacggcgccgacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgcc
atcaaggactcggcccgcgtcctcgggtacccgtacgcgatgggcgaccggctcaccaag
gcgatgcccgccgacgtcctcggcaagggcatcgacctcgacggcatcaccaacccgaag
cacccgcgctacagcgaggcgggcgagatccgggggatgtacgagaacgagccggacgtg
aagaaggtcatcgacaccgccaagggcgtcgagggcctggtccggcagatgggtgtgcac
gcggccggcgtgatcatgtccagcgagccgatcgtcgaccacgccccgctgtggacccgg
cacaccgacggcgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctg
ctgaagatggacttcctcggcctgcgcaacctcaccatcatggacgacgcgcggaagatg
gtggaggccaacaagggcatcgacctcgacctgctcgccctgccgctggacgacccgaag
accttcgaactcctctgccgcggtgacaccctgggcgtcttccagttcgacggcggaccc
atgcggtccctgctgcggctgatgaagcccgacaacttcgaggacatttccgccgtctcg
gccctgtaccggccgggcccgatgggcatgaactcgcacaccaactacgccctgcgcaag
aacggccagcaggagatcaccccgatccacccggagctggaggagcccctcaaggagatc
ctcggcctcacctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcgcagatc
atcgccggctactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaag
cccgaggagctggcgaagaacttcgtcctcttccaggagggcgcgaagaagaagggcttc
tccgacgaggcgatccaggcgctctgggacgtcctggtgcccttcgccggctacgccttc
aacaaggcgcactcctccgcgtacggcctggtcacctactggaccgcgtacctcaaggcc
aactacccggccgagtacatggcggcgctgctcacctcggtcaaggacgacaaggacaag
tcggccgtctacctgaacgagtgccggcgcatgaagatcaaggtgctgccgccggacgtc
aacgagtcggtgcacaacttcgccgcccagagcgacgacgtgatcctcttcggcctcgaa
gcggtccgcaacgtcggcaccaacgtggtcgagtcgatcatccgcgcccgcaaggcgaag
gggaagttctcctccttccccgactacctcgacaagatcgaggcgcaggcgtgcaacaag
cggaccaccgagtcgctgatcaaggccggggccttcgacgcgctcggccacacccgcaag
gggctcaccgcgcactacgagcccatgatcgacaatgtggtggcggtcaagcgcaaggag
gccgaggggcagttcgacctcttcggcggcatgggcgacgacaacgccgacgagccgggc
ttcggactcgacatcgagttcaccgacgaggagtgggacaagacctacctcctcgcccag
gagcgcgagatgctcggcctctacgtctccgaccacccgctcttcgggctggagcacgtc
ctctccgacaaggccgacgccgggatcgggcagctcaccggcggtgacttcggggacggc
gcggtcgtcacggtcggcggcatcatctccggtctccagcgcaagatgaccaagcagggc
aacgcctgggccatcgccaccgtcgaggacctcgccggttccatcgagtgcatgttcttc
cccgccacctaccagctggtctccacgcaactcgtcgaggacgccgtcgtcttcgtcaag
gggcgcctggacaagcgggaggacatcccgcggctggtcgcgatggagctccaggtcccc
gacctctccaacgcgggcaccaacgccccggtgatcatcaccatcccggcggtcaaggtg
accccgccgatggtcagccgcctcggcgaggtgctcgactcccaccgcggcaactccgag
gtgcggatcaagctccagggcccccgcaagaccacggtgctccggctcgaccggcaccgg
gtccagcccgacccctcgctcttcggcgacctcaaggtgctgctcggcgcctcctgcctg
gcgggctga
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integrated database retrieval system
